| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3430 |
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| Symbol | |
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| ID | 5610440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4180390 |
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| End bp | 4181589 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640934370 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit B |
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| Protein accession | YP_001475162 |
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| Protein GI | 157376562 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1805] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB |
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| TIGRFAM ID | [TIGR01937] NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0895554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTTGA AACAGTTATT CGAAAATATT GAACCGCAGT TTGAAAAAGG CGGTAAATAT
GAGAAGTTTT ATGCGCTCTT CGAAGCTGCA TATACGGTGT TTTATACGCC GGGTCAGGTG
AACAAAGGGG CAACCCATGT TCGTGATAAC CTCGACCTGA AGCGTATGAT GATCATGGTT
TGGGCCTGCG TATTTCCTGC GATGTTCGTG GGTATGTATA ACGTTGGGTT ACAGGCTCAG
GTTGCTTTAG CGAGTGGCTT TGCTTCACCA GATGTTTGGC AGGTCAGCCT GTTCAGCATG
TTTGGTACTG AGTTGAGTGC AAGCTCTACC TGGCCAACAC TCATGTGGTA CGGCGCCTGC
TTCTTCCTGC CTATCTATGC GGTTTCATTC GCAGTCGGTG GTATTTGGGA AGTCTTGTTT
GCCTCTGTAC GCGGTCATGA AGTTAACGAA GGTTTCTTTG TTACCTCCAT TCTTTTTGCG
CTAACACTAC CACCTAACAT TCCATTATGG ATGGTTGCCT TAGGTATCAC CTTCGGTGTG
GTTGTAGCCA AGGAGATATT CGGTGGAACA GGGCGTAACT TCCTCAACCC AGCACTTGCC
GGTCGTGCTT TCCTATTCTT CGCTTACCCT CTGAGTATGT CTGGTGACAC CTCTTGGGTA
GTTGCCGATG GATTCACTGG CGCTACAGCA CTTAGCCAAG CGGCTCAAGG TACACTTGAG
TTTGGCTTTA ACCAAGATTG GTGGGATAAC TTCCTGGGCT TCATTCCAGG TTCGGTCGGT
GAAGTCTCGA CCCTGGCACT TCTATTGGGT GGCGCAGTCA TCGTTTATGC CCGTATCGCT
TCATGGCGCA TTATCGCAGG TGTGATGGTC GGTATGATTG CCGTCTCTAT GCTCCTCAAT
GCAATTGGTA GTGATACTAA CCCTATGTTT GCTATGCCTT GGTACTGGCA CTTGGTACTC
GGTGGTTTTG CCTTCGGTAT GATGTTTATG GCAACCGACC CTGTATCGGC TTCGTTTACC
AACCAGGCGA AATGGAGTTA CGGGATCTTG ATTGGTGCAA TGGCTGTGTT TATTCGCGTC
ATTAACCCTG CATTCCCTGA AGGTATGATG TTGGCCATCT TATTCGCCAA CCTGTTTGCA
CCGCTGTTTG ACCATTTTGT GGTTCAGGCA AATATCAAGC GGAGGATCGC TCGTGGCTAG
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| Protein sequence | MGLKQLFENI EPQFEKGGKY EKFYALFEAA YTVFYTPGQV NKGATHVRDN LDLKRMMIMV
WACVFPAMFV GMYNVGLQAQ VALASGFASP DVWQVSLFSM FGTELSASST WPTLMWYGAC
FFLPIYAVSF AVGGIWEVLF ASVRGHEVNE GFFVTSILFA LTLPPNIPLW MVALGITFGV
VVAKEIFGGT GRNFLNPALA GRAFLFFAYP LSMSGDTSWV VADGFTGATA LSQAAQGTLE
FGFNQDWWDN FLGFIPGSVG EVSTLALLLG GAVIVYARIA SWRIIAGVMV GMIAVSMLLN
AIGSDTNPMF AMPWYWHLVL GGFAFGMMFM ATDPVSASFT NQAKWSYGIL IGAMAVFIRV
INPAFPEGMM LAILFANLFA PLFDHFVVQA NIKRRIARG
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