| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3426 |
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| Symbol | |
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| ID | 5613577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4177064 |
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| End bp | 4178311 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640934366 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit F |
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| Protein accession | YP_001475158 |
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| Protein GI | 157376558 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2871] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF |
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| TIGRFAM ID | [TIGR01941] NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATTC TTAAATCTAC TCCTCTCGAG GTTTACCTCG GTGTGAGTAT GTTTACCGCT
ATTGTCTTAG GTTTGGTGCT AATCATTTTA TTTGCCAAGT CAAAGTTAGT GAACAGTGGT
GACATTACAA TTGGTATTAA TGATGATCCT GAAAAAGGGA TCAGCATACC TGCTGGTGGT
AAGTTACTTG GTGCACTCGC TGAGCAGGGT ATTTTTATAC CGAGCGCCTG TGGCGGCGGT
GGTACTTGCG GTCAGTGTAA AGTACATGTT AAATCAGGCG GCGGTGATAT TCTGCCAACT
GAGATGGACC ATATCAATAA AGGTGAGGCT CGTGAGGGCT GTCGTTTATC TTGCCAGGTA
AACGTGAAAA CCGATATGGA AATTGAACTC GAAGAGGAGA TCTTCGGTGT TAAGAAGTGG
GAATGTACCG TTATCTCTAA CGATAACAAG GCCACTTTCA TTAAAGAGCT TAAGCTTCAA
ATCCCTGATG GTGACTCGGT ACCTTTCCGT GCCGGTGGTT ACATTCAAAT TGAAGCGCCT
GTTCATCACG TTAAATATGC AGATTATGAT ATTCCTGCAG AATACCGTGG CGATTGGGAA
CACTTTGGTT TCTTCAACTT AGAATCTAAA GTTGATGATG AGACAATCCG TGCATATTCA
ATGGCGAACT ATCCTGAAGA GGAAGGTATC ATCCTGTTGA ACGTGCGTAT TGCGACGCCT
CCGCCACGTA ACCTAACACT GCCTTGCGGT AAGATGTCTT CGTACATCTT TAGCCTTAAA
GAGGGTGACA AGGTGACAAT CTCGGGTCCA TTTGGTGAGT TCTTCGCTAA AGAGACTGAT
AATGAGATGG TATTTGTCGG TGGTGGTGCA GGTATGGCGC CGATGCGTTC TCATATCTTC
GACCAACTTA AGCGTCTTAA GACTAACCGC AAGATGAGCT TCTGGTATGG CGCCCGTTCT
AAGCGTGAAA TGTTCTATGT TGAAGATTTC GATGGCTTAG CGGCTGATAA CGAGAACTTC
GATTGGCATG TGGCACTTTC TGATCCTCAG CCTGAGGACA ACTGGGAAGG CAAGACTGGT
TTCATTCATA ATGTACTTTA TGAAAGTTAC CTGCGCGACC ATGAAGCGCC GGAAGATTGT
GAGTTCTACA TGTGTGGTCC TCCAATGATG AACGCCGCAG TTATCGGTAT GCTTAAAGAC
TTAGGTGTCG AAGATGAAAA CATCCTGCTG GATGACTTCG GTGGCTAA
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| Protein sequence | MDILKSTPLE VYLGVSMFTA IVLGLVLIIL FAKSKLVNSG DITIGINDDP EKGISIPAGG
KLLGALAEQG IFIPSACGGG GTCGQCKVHV KSGGGDILPT EMDHINKGEA REGCRLSCQV
NVKTDMEIEL EEEIFGVKKW ECTVISNDNK ATFIKELKLQ IPDGDSVPFR AGGYIQIEAP
VHHVKYADYD IPAEYRGDWE HFGFFNLESK VDDETIRAYS MANYPEEEGI ILLNVRIATP
PPRNLTLPCG KMSSYIFSLK EGDKVTISGP FGEFFAKETD NEMVFVGGGA GMAPMRSHIF
DQLKRLKTNR KMSFWYGARS KREMFYVEDF DGLAADNENF DWHVALSDPQ PEDNWEGKTG
FIHNVLYESY LRDHEAPEDC EFYMCGPPMM NAAVIGMLKD LGVEDENILL DDFGG
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