| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3422 |
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| Symbol | |
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| ID | 5610721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4173238 |
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| End bp | 4174320 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640934362 |
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| Product | DNA polymerase IV |
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| Protein accession | YP_001475154 |
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| Protein GI | 157376554 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAAAAA TCATTCATAT CGATATGGAT TGTTATTTTG CCGCGGTGGA GATGCGTGAC
TTCCCTGAGT TAAGGGGGAA ACCCATCGCC GTGGGAGGAA GAAGCGACAG GCGAGGTGTC
ATCAGTACCT GTAACTATGA AGCCAGGAAA TTTGGTGTTC GCTCAGCCAT GGCCTCGGGC
TATGCCCTGA AACTCTGCCC CGATTTGATA TTGGTGCCGG GACGCATGTC CGTTTACAAG
GAGGTGTCGG CACAGATCAG GGAAGTTTTT TCTCACTACA CCGACTTGAT AGAGCCGCTC
TCACTCGATG AAGCCTATCT CGATGTCACC GACTGCACCC AGTGTCAGGG TTCGGCAACA
TTAATCGCTG AGGCCATTCG ACAAGAGATA TTTGAACTTA CGGGGTTAAC CGCCTCAGCC
GGAATCGCCC CCATTAAGTT TCTCGCAAAG ATAGCTTCAG ATCTTAATAA ACCTAACGGA
CAGTATGTGA TAACGCCCAA TATGATCCCG GCATTCGTAA AGGATCTGCC GCTTATCAAG
ATCCCCGGAG TGGGCAAGGT TACTGGCAAA AAACTTGAAG ATATCGGTTT AATCACCTGT
AGCGATCTGC AGGCTTATCC TGAAGCGGCG TTAATTGAGC GATTTGGGAA ATTTGGTTCC
GTATTGATTG AACGTGCACA AGGTATCGAT ACTCGTAATA TCTCTCCCCA CAGGGAACGA
AAGTCCGTGG GCGTAGAGAC CACGCTGGCT AAGGATATCT ATAGCTTAGA GCAGTGTCAG
GGGGTAATGC CCCAGTTGAT CCAGGAGTTA GCGACTCGAA TAAAGCGTAG CGCCAAAGAT
CGCACCATCC ATAAGCAGGT CGTTAAGCTT AAGTTTAATG ATTTTAAACA GACGACCATA
GAGCATCGAA GCGATGAGGT GTCGGTAAAG TTGTTTTATG ATCTACTTTC ACAGGCGTTA
GAGCGGCAGC AGGGGCGAGG CATTCGATTA CTTGGCGTTT CCGTAGGCTT AGCGAGTCAG
TCTGATATTA AAACAGCCGA AGAGAATGAA GTGAGAGAGT CGCAGATGGA CCTTGGGTTT
TAA
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| Protein sequence | MKKIIHIDMD CYFAAVEMRD FPELRGKPIA VGGRSDRRGV ISTCNYEARK FGVRSAMASG
YALKLCPDLI LVPGRMSVYK EVSAQIREVF SHYTDLIEPL SLDEAYLDVT DCTQCQGSAT
LIAEAIRQEI FELTGLTASA GIAPIKFLAK IASDLNKPNG QYVITPNMIP AFVKDLPLIK
IPGVGKVTGK KLEDIGLITC SDLQAYPEAA LIERFGKFGS VLIERAQGID TRNISPHRER
KSVGVETTLA KDIYSLEQCQ GVMPQLIQEL ATRIKRSAKD RTIHKQVVKL KFNDFKQTTI
EHRSDEVSVK LFYDLLSQAL ERQQGRGIRL LGVSVGLASQ SDIKTAEENE VRESQMDLGF
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