| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3421 |
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| Symbol | |
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| ID | 5610720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4171733 |
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| End bp | 4173193 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640934361 |
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| Product | Xaa-His dipeptidase |
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| Protein accession | YP_001475153 |
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| Protein GI | 157376553 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2195] Di- and tripeptidases |
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| TIGRFAM ID | [TIGR01893] aminoacyl-histidine dipeptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.11643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAGCAT TAAGTCAATT ACAACCTCAA GCCCTGTGGC AGTGGTTCGA ACAAATTTGT
GCAATTCCCC ATCCATCTAA ACATGAGCAG GCTTTGAGCG AACATATTCA AGCCTGGGCC
AAAGATAAAC AACTCGAACT GGTTGAAGAT AAAGTCGGTA ACCTCATCAT TAAGAAGCCT
GCTACACCGG GTATGGAAAA CCGTAAGGTT GTTGCCCTGC AGGCTCATAT CGATATGGTG
CCGCAGAAGA ACTCTGATAA AACGCATGAT TTCGAGAAAG ACGCGATTGA ACCTTTTATC
GATGGTGAAT GGGTAAAAGC GACCGGAACA ACCTTAGGTG CCGATAATGG TATCGGCATG
GCGTCTGCAT TAGCCATTTT AGGTTCAGAC GATATTCCTC ACGGCCCACT GGAAGTCCTG
CTGACAATAG ATGAAGAAGC GGGCATGACG GGTGCATTTG GACTGGAAGC CGGTTACCTG
AATGCAGATA TTCTGATCAA CACAGACTCT GAGCAGGAAG GCGAGATCTA CATGGGTTGC
GCCGGTGGTG TTGACGGACA GATTAGCGTG CCTATGGTTT GGCAAGCTCC TGAGCAAAGT
CACTCAACCT ACACCTTAAC CCTTTCAGGC TTGAAAGGTG GCCATTCAGG GGTAAACATT
CACTTGGGTC GCGGTAACGC GAATAAACTA TTAGCTCGCT TCCTGTTTAA CCATGCAGAC
GAATTAGCCT TAGAGTTAAC GAACTTCACT GGTGGCTCTC TGCGAAATGC TATCCCACGT
GAAGCCTCGG TAAGCTTTAT GCTGCCAGCT GAAAACATCA CAAAACTTGA TGCCCTGGCG
AAAGAGTTTC AGGCGTTAGT AAGAGAAGAG CTTGCTATTG CCGATCCGGA CATGGTGCTG
GAGCTACTCG AAGCCCCGGC TGCTAAACAA GTGATGAGCG AAGATGCTCA GAATATGCTT
ATCGACCTAC TTAATGCGTG TCCAAATGGC GTTATCCGCA TGAGTGATGA GGTTGAAGGC
GTTACTGAAA CATCATTAAA TGTAGGTGTG ATTAGCACAG AAGCAGAAAG TGTTGAAGTT
CTTTGCTTAA TTCGCTCTCT TATCGATTCT GGTCGCCAGG AAATTGAAAC TGTTTTAACT
TCACTCACCA ACCTAGCCGG TGCTGAAATC CAGTTTAGCG GCGCATATCC AGGCTGGAAG
CCAGACAACA GCTCACCGGT AATGGCATTG GTACGCGAGA CCTACGACAG CATCTACAAC
AAAGAGCCTG TGATCATGGT GATTCATGCC GGACTCGAGT GTGGTCTGTT TAAGAAACCC
TACCCTGAGA TGGATATGGT ATCGATTGGC CCAACCATTC GTTACCCACA CAGTCCGGAT
GAAAAAGTCT TGATTGAAAC CGTTGATCAA TACTACAAGC TACTGTTAGC CGTACTGGAA
CGTATTCCAG AGAAAGGTTA A
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| Protein sequence | MTALSQLQPQ ALWQWFEQIC AIPHPSKHEQ ALSEHIQAWA KDKQLELVED KVGNLIIKKP
ATPGMENRKV VALQAHIDMV PQKNSDKTHD FEKDAIEPFI DGEWVKATGT TLGADNGIGM
ASALAILGSD DIPHGPLEVL LTIDEEAGMT GAFGLEAGYL NADILINTDS EQEGEIYMGC
AGGVDGQISV PMVWQAPEQS HSTYTLTLSG LKGGHSGVNI HLGRGNANKL LARFLFNHAD
ELALELTNFT GGSLRNAIPR EASVSFMLPA ENITKLDALA KEFQALVREE LAIADPDMVL
ELLEAPAAKQ VMSEDAQNML IDLLNACPNG VIRMSDEVEG VTETSLNVGV ISTEAESVEV
LCLIRSLIDS GRQEIETVLT SLTNLAGAEI QFSGAYPGWK PDNSSPVMAL VRETYDSIYN
KEPVIMVIHA GLECGLFKKP YPEMDMVSIG PTIRYPHSPD EKVLIETVDQ YYKLLLAVLE
RIPEKG
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