| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3414 |
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| Symbol | |
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| ID | 5610751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4162737 |
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| End bp | 4163555 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640934354 |
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| Product | Beta-lactamase |
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| Protein accession | YP_001475146 |
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| Protein GI | 157376546 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.062557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTATAT ACCTTGATTT TGTTGCGGCA GCATTCAGCT TTGCTATTCC CTACCTACGT
GCGGGGGCCG TCGTACTATT GCTGGGAGCG AGTTTTAGTT CGGTTGCTGA AATTCATCAC
CCGGAAGCCG CTTGGTCATC AGATGCCATC AAGATAAAGC AGGTGTCACC GGCGCTATAT
TTGGTGAAGT CTTATAAAGA GATCAAACTA TATCAAGATA AACCTGCAAT GACTTTTGAT
TCAAACTCAT TTATCTATGT CGATAAACAC AATGCCTATC TTATCGATAC TCCGTGGAGT
GAATCGGATA TGCCGGATCT GATGAGTTGG TTGAAGATTC AAAAGCTGCT GCTTAAGGGA
ACGATAGTCA CCCACTATCA CCAAGATAGG GCCGGAGGCT TGGGTTATCT CGATAAACAT
GGCTTCGCTA CTTACGCATC GGATATGACT AATCAGTTAT TAGTTAAGGA TAAGCAGCCA
ATGTCAAACC ATAGCTTTTC AGGGGATAAA TTCGAACTGC TTAAAGGCCA AATAGAGACG
TACTATCCGG GTTCAGGTCA TAGTATGGAT AACTTGGTTG TCTGGTTACC AAAGGAAAAC
ATATTGATCG GTGGCTGCTT ATTGAAGTCA AACGAAACGA ATAACCTTGG CTGGACAGGA
GACGCTGACT TAGCCAACTG GTATCACTCT GCGAGTAAGG TAAAAGCAGA TTTTCCGCAA
GCGAAGTTCA TCTTCCCTGG TCATGGTGAT GGGGCGGAAG GGCAATCGAT ATTGGAACAT
ACCATGGCTC TCACCAAAGG GGTTGCCAGC TTGAAATGA
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| Protein sequence | MSIYLDFVAA AFSFAIPYLR AGAVVLLLGA SFSSVAEIHH PEAAWSSDAI KIKQVSPALY
LVKSYKEIKL YQDKPAMTFD SNSFIYVDKH NAYLIDTPWS ESDMPDLMSW LKIQKLLLKG
TIVTHYHQDR AGGLGYLDKH GFATYASDMT NQLLVKDKQP MSNHSFSGDK FELLKGQIET
YYPGSGHSMD NLVVWLPKEN ILIGGCLLKS NETNNLGWTG DADLANWYHS ASKVKADFPQ
AKFIFPGHGD GAEGQSILEH TMALTKGVAS LK
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