| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3405 |
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| Symbol | |
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| ID | 5609606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4151305 |
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| End bp | 4152120 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640934345 |
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| Product | dihydrodipicolinate reductase |
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| Protein accession | YP_001475137 |
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| Protein GI | 157376537 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0289] Dihydrodipicolinate reductase |
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| TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.408916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000220651 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGAGTG AACCAGTAAG AGTGGCTATT ACGGGCGGTA GTGGCCGCAT GGGACGAACT
CTTATCGAAG CCGCCAGACA ACAACCAAGT ATTTTGTTGG GAGCAGCCAT CGAAAGGGCT
GGTTCGACAT TAATTGGTGT GGATGCTGGT GAGCTTGCTG GTGTGGGGGC AATGAATGTC
GCTATTACGG ATTCGCTCGA TAAGGTTGTC GATGACTTCG ATATCCTTAT TGACTTCACT
TCTCCTGAAG CGAGCATAGT CCATACCGAT TGGTGTGCTA GAAACGGTAA AGCCATAGTC
ATTGGCACTA CCGGTTTCAA TCATGCTCAA AAAGAGCAGA TTTCTGCTTA CTCAGAATCA
ACACCCATTG TGATGGCACC TAATATGGCT GTCGGTGTTA ACCTTATGTG GAAGTTACTT
GAGGTCGCTG CAAAAGTGAT GGGTGACTAT ACCGATATCG AAATTATCGA GGGTCACCAT
AGGTACAAGA AGGATGCGCC TTCAGGTACT GCGCTTAAAA TGGGTGAAGT CATTGCCGAG
GCCTTAGGCC GTGATCTTGA AAAATGTGCC GAGTATGGCC GGGAAGGGAT CACGGGTGAG
CGAGATCGTG AAACGATAGG TTTCTCTACC ATTCGTGCCG GTGATCTGGT TGGTGAACAT
ACGGCTATGT TTGCCGATAT CGGTGAGCGA ATAGAGATCA CTCATAAGGC GTCGAGTCGA
ATGACCTTTG CCAATGGTGC CATGCGCGCG GCATCCTGGT TAGCTGAGGA AGATCCTGGT
CTTTATGACA TGCAGCAGGT ATTAGGACTC AATTAG
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| Protein sequence | MMSEPVRVAI TGGSGRMGRT LIEAARQQPS ILLGAAIERA GSTLIGVDAG ELAGVGAMNV
AITDSLDKVV DDFDILIDFT SPEASIVHTD WCARNGKAIV IGTTGFNHAQ KEQISAYSES
TPIVMAPNMA VGVNLMWKLL EVAAKVMGDY TDIEIIEGHH RYKKDAPSGT ALKMGEVIAE
ALGRDLEKCA EYGREGITGE RDRETIGFST IRAGDLVGEH TAMFADIGER IEITHKASSR
MTFANGAMRA ASWLAEEDPG LYDMQQVLGL N
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