| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3389 |
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| Symbol | infB |
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| ID | 5610146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4129716 |
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| End bp | 4132406 |
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| Gene Length | 2691 bp |
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| Protein Length | 896 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640934327 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_001475121 |
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| Protein GI | 157376521 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.479948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00172114 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAGATA CAACAGTAGA AAAGCTGGCC AGTGAAGTAG GAAAAAGTGC AGACAGATTA
GTTGAGCAGT TTTCCGAGGC CGGTATTAAG AAATCTAAAG CTGACACGGT TTCCGAGTCA
GAAAAGCAAC AATTGCTAGA ATTTTTGAAG AAGCAACATG GCGGCGAATC GGCTCCAACT
AAAATGACAC TACAGCGTAA GTCAGTGTCT ACCTTGAGCG TAGGTTCTGG TAGTGCTTCA
AAAGACGTAA AAGTTGAAGT TCGCAAGAAG CGTACTTTCG TTAAGCGTGA TCCTGCTGCA
GATGCTGAAG CTGAAGCGGC TGCGAAAGCG GAAGCAGAAG TTAAAGCTGC TGAAGAAGCG
GCTTCAAAAG CGAAAGCCGA TGCCGAAGCT AAAGCTAAAG CAGAAGCCAA GGCTAAAGCC
GATGCCGAAG CGAAAGAGAA GGCTAAAGCC AGCGCTGCTG AGAAAGCTAA GCCTGTAGCG
GTTACCGCCG AAGAGAAAGC GGCGCAAGAT GAAGCCGACA AGCTTCAAGC TGCAAAAGAT
ACAGCTGCTA AAGCTAAGGC TGATGAAGAA GCCAAAGCGG CTGCAGAAAT CGCGAGAAAG
CTTGCTGAAG AAAACTCTGC TCGTTGGGCT GAAGAAGAGA AACAACGTAA AGAATCAGAG
AAGACTGGTG ATCATCACGT AACGACTTCT ACAGAGGCGC GTGCAGCGGA AGATACTGCC
GATGCTAATG CCGAGAAGCG CGGTCGTCGT CCTCGTAAAG CTACGCCTGC ACCAGCGGCT
GCACCAGCAA ATACTGGTAA AGGCAAGCGT CGTGGCGGCA AAGATAACCG TCGTGATAGC
CGTAATGCAC GCGGTGGACG TAATGCCCGT AACAATCGTA GTGTCGCGCC TGAGTCTATG
GACCATGCAT TCACTAAGCC TGTTGCCGCA GTTAAAACTG ATGTAAGCAT TGGTGAAACG
GTTTCAGTTT CTGAACTGGC ATCTAAGATG TCAATTAAGG CCACTGAAAT CATCAAGCAG
ATGATGAAGA TGGGCTCTAT GGTTACGATT AACCAGGTGC TTGATCAAGA AACTGCTCAA
CTTGTTGCCG AAGAGATGGG ACATAAAGTT GTTCTGACAC GTGAAAACGA ACTAGAACAT
CAAGTGCTTG CGGATCGTGA CGCTAATATT CAAGCCGAAT CACGTGCTCC GGTTGTGACT
ATCATGGGTC ACGTTGACCA CGGTAAGACC TCACTACTTG ACTACATTCG TCGTGCTAAA
GTTGCCTCAG GCGAAGCCGG TGGTATTACC CAGCATATCG GTGCATACCA CGTTGAAACT
GACAATGGCA TGATCACTTT CCTCGACACT CCTGGTCACG CGGCATTTAC TGCCATGCGT
GCTCGTGGTG CGCAGGCAAC TGATATCGTT ATCTTGGTTG TTGCAGCAGA TGATGGCGTT
ATGCCACAGA CAATTGAAGC GATTCAACAC GCGAAAGCGG GTGGCGTACC TCTGATTGTT
GCAGTGAACA AGATTGATAA GCCAGAAGCC GATCCTGAGC GTGTGAAGAG TGAACTTTCA
CAGCACGGTG TTATGTCTGA AGACTGGGGC GGAAACAACA TGTTTGTTCA CGTTTCAGCT
AAGAGCGGTG AAGGTATCGA TGAGCTGCTT GAAGGTATTC TTCTTGAAGC TGAAGTACTC
GAGCTTAAGG CTATTAAAGA AGGCATGGCT GCAGGTGTGG TTGTTGAGTC TAAGTTGGAT
AAGGGCCGTG GCCCGGTTGC AACTGTATTG GTTCAGGAAG GTACACTTAA GCAAGGCGAT
ATCGTTCTTT GTGGTCTGGA ATACGGTAAA GTTCGTGCTA TGCGCGATGA AAATGGCAGA
GCTATCAAAG AAGCCGGTCC GTCAATTCCT GTAGAGATCT TAGGTCTTTC AGGTGTACCG
TCTGCAGGTG ATGAAGCGAC AGTGGTTCGT GATGAGCGTA AAGCTCGTGA AGTTGCACTC
TATCGTCAAG GTAAATTCCG TGATGTTAAG CTTGCACGTC AGCAGAAGTC TAAGCTTGAA
AACATGTTTG CTAACATGGT TGAAGGTGAA GTTCAGGAAC TAAACATCAT CCTTAAGGCT
GATGTACAAG GTTCACTCGA AGCGATTGCA GACTCGTTGA ACAAGCTTTC AACTGATGAA
GTTAAAGTTA ATATCATCGC CCGCGGCGTT GGTGGTTTGA CTGAGACTGA CGCTTCACTC
GCTGCAGCTT CTAATGCCAT TATGATCGGT TTCAACATTC GTGCCGATGC ACAGGCTCGT
AAAGTTATTG ATGCTGAAAG TGTAGATCTA CGTTACTACA GCGTTATCTA TCATTTGATT
GATGAAGTCA GAAATGCGAT GAGCGGTCTA CTTGCTCCTG AATTTAAGCA AGTGATTCTT
GGTCTTGCTG AAGTTCGTGA TGTGTTTAAG TCTCCTAAGA TTGGTGCTAT CGCCGGTTGT
ATGGTTACTG AAGGTACCAT CAAGCGTAGC GCACCAATTC GCGTACTTCG TGAAAACGTT
GTTATCTATG AAGGTGAGCT AGAGTCACTT CGTCGATTTA AAGATGACGT TGCTGATGTT
CGTAACGGAA TGGAATGTGG TATCGGTGTG AAGAACTATA ATGATGTCAG AGTTGGCGAT
CAGATAGAGG TCTTCGAAAC AATCGAAATA GCACGCTCCT TAGAAGAGTA A
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| Protein sequence | MADTTVEKLA SEVGKSADRL VEQFSEAGIK KSKADTVSES EKQQLLEFLK KQHGGESAPT
KMTLQRKSVS TLSVGSGSAS KDVKVEVRKK RTFVKRDPAA DAEAEAAAKA EAEVKAAEEA
ASKAKADAEA KAKAEAKAKA DAEAKEKAKA SAAEKAKPVA VTAEEKAAQD EADKLQAAKD
TAAKAKADEE AKAAAEIARK LAEENSARWA EEEKQRKESE KTGDHHVTTS TEARAAEDTA
DANAEKRGRR PRKATPAPAA APANTGKGKR RGGKDNRRDS RNARGGRNAR NNRSVAPESM
DHAFTKPVAA VKTDVSIGET VSVSELASKM SIKATEIIKQ MMKMGSMVTI NQVLDQETAQ
LVAEEMGHKV VLTRENELEH QVLADRDANI QAESRAPVVT IMGHVDHGKT SLLDYIRRAK
VASGEAGGIT QHIGAYHVET DNGMITFLDT PGHAAFTAMR ARGAQATDIV ILVVAADDGV
MPQTIEAIQH AKAGGVPLIV AVNKIDKPEA DPERVKSELS QHGVMSEDWG GNNMFVHVSA
KSGEGIDELL EGILLEAEVL ELKAIKEGMA AGVVVESKLD KGRGPVATVL VQEGTLKQGD
IVLCGLEYGK VRAMRDENGR AIKEAGPSIP VEILGLSGVP SAGDEATVVR DERKAREVAL
YRQGKFRDVK LARQQKSKLE NMFANMVEGE VQELNIILKA DVQGSLEAIA DSLNKLSTDE
VKVNIIARGV GGLTETDASL AAASNAIMIG FNIRADAQAR KVIDAESVDL RYYSVIYHLI
DEVRNAMSGL LAPEFKQVIL GLAEVRDVFK SPKIGAIAGC MVTEGTIKRS APIRVLRENV
VIYEGELESL RRFKDDVADV RNGMECGIGV KNYNDVRVGD QIEVFETIEI ARSLEE
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