| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3386 |
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| Symbol | rpsO |
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| ID | 5610355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4127810 |
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| End bp | 4128079 |
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| Gene Length | 270 bp |
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| Protein Length | 89 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640934324 |
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| Product | 30S ribosomal protein S15 |
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| Protein accession | YP_001475118 |
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| Protein GI | 157376518 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0184] Ribosomal protein S15P/S13E |
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| TIGRFAM ID | [TIGR00952] ribosomal protein S15, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00388546 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCACTAA ATGCTGAACA AACTGCAACA ATCCTGGCTG AATTCGGTCG TAGTGAAGGC
GATACTGGTT CTACTGAAGT TCAGGTAGCT CTTTTAACTG CACAGATTAA CCATCTGCAA
GGTCACTTTA AAGAGCACAA GCATGATCAT CACTCACGTC GTGGTCTTTT ACGTATGGTA
AACACACGTC GTAAACTTCT TGCATACCTG AAGCGTACTG AAAATGTTCG TTACCAGGAA
CTAATCAAGA AGCTAGGTCT ACGTCGTTAA
|
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| Protein sequence | MSLNAEQTAT ILAEFGRSEG DTGSTEVQVA LLTAQINHLQ GHFKEHKHDH HSRRGLLRMV
NTRRKLLAYL KRTENVRYQE LIKKLGLRR
|
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