| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3374 |
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| Symbol | |
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| ID | 5609594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4110441 |
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| End bp | 4111187 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640934312 |
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| Product | membrane protein |
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| Protein accession | YP_001475106 |
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| Protein GI | 157376506 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3726] Uncharacterized membrane protein affecting hemolysin expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.181887 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTTTTC TTAAAGGACT GAAAAAGAGC CATAGAATTA GCAGACTACT GCAGATGGCC
ATAGCGCTGA CACTCGCTGT GGGTCTGATT CAGTTATGGG AAACCAGCCT ACTACAAGGG
CAGCAGCTTC TAAAGTCCCA AACGCAAAAG ATGGCAAGAT TACTCGTTCA GCAGACGGCC
TACGGGGCGG CACCGGCTCT CCAATTGCAA AATGATGAAC AGTTGCAATG GCTCGCCAGC
GCCTTAGTAG AAGACCCCAA GGTGATGTCG GCCAGTATTT TCAGTGAGGA TGGACAGAGG
CTATCATTTG CGCAGAGTGT CACCGATGAG GAGCTTGAGC CTGACTCTGA TGAGCTCAAT
AAACTGCTGG AACGTTACCC TCCCTATGTT GAGGCGGTAA CACAAGATGA CATTAATTTA
GGTTTTATCG AGGTCAGGCT AGAGCCCAGA TTATTCTTTA ACGAGATTAA AGAGGCTCAC
CAGATCAATA TGGAACAGCA GCAGATGATG TTGATCATCG CAGGCTTAAT CGGCATGTTG
CTATCCCGCT CACTCTCCTT CAAGAGGGCC GATTTCGACC GCCGTAAAAC ACGGGCAAAG
TTAAGACAGA AGCCTGGAAA GTTAAGGAAG AGAGAGCAGG AAAAACTCAG GAAGGCACTG
GCTAAGAGTC AAAAGAAGCA AGCGGGTAAA GGTAAGGCGA ATGGCGAGAA CGCCGAAAAA
AGCGAAGAAA TTGATAAAAC TGAATAA
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| Protein sequence | MFFLKGLKKS HRISRLLQMA IALTLAVGLI QLWETSLLQG QQLLKSQTQK MARLLVQQTA
YGAAPALQLQ NDEQLQWLAS ALVEDPKVMS ASIFSEDGQR LSFAQSVTDE ELEPDSDELN
KLLERYPPYV EAVTQDDINL GFIEVRLEPR LFFNEIKEAH QINMEQQQMM LIIAGLIGML
LSRSLSFKRA DFDRRKTRAK LRQKPGKLRK REQEKLRKAL AKSQKKQAGK GKANGENAEK
SEEIDKTE
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