| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3367 |
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| Symbol | |
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| ID | 5610083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4099332 |
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| End bp | 4100042 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640934305 |
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| Product | DNA-binding transcriptional regulator TorR |
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| Protein accession | YP_001475099 |
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| Protein GI | 157376499 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGTATA ACGTACTGGT TGTTGATGAT GAAGCGGTAA TTCGCGCAAG ACTGAAAGGC
TATTTTGAGA AAGAGGGCTA TCGGGTTCAT GAAGCTCAAG ATGGCGAACA GATGTGGAAT
GAGTTCAATC GTCAGCACAT CGATCTGGTG ATGTTAGATA TCAATCTTCC CGGTGTCGAT
GGCCTGAGTT TGGCCAGAGA GTTACGTAGC CGCTCCGATG TCGGCATCAT CCTGGTGACC
GGACGCGATG AAGCTATCGA TAAGATCATC GGTCTAGAGA TGGGCGCCGA CGATTATGTG
ACTAAGCCCT TCGAGCTGCG TGAGCTGCTT GTCAGAGTTA AAAACTTGCT CTGGCGGATG
TCGTTAGTGA AAAAAGCGGA GCAAGCCGTG GTTGAGCAAC TCGACCAGAA GGATGATGAA
ATTGCCTTCG ATAATTATGT GCTAGAGCTC AATAGTCGTA AGTTGAGGCG CGGCGATGAG
CTGATAAAGC TGACTAAAGC CGAGTTTGAG TTATTAGCCG CATTTGCCCT TCATCCACAG
CAGGTTCTGT CTCGTGAGCG GTTGATGCAG CAGACTAGTC ATCGAAATCA GGATGTGAAT
GACAGAACCA TAGATGTGAT CATCAGGCGT CTGAGAAACA AACTCGATGC GGATCTGTTT
GTCACCGTAC ACGGGGAAGG TTACCTCTTC TCTGCGACAG TGAGTGGATA A
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| Protein sequence | MAYNVLVVDD EAVIRARLKG YFEKEGYRVH EAQDGEQMWN EFNRQHIDLV MLDINLPGVD
GLSLARELRS RSDVGIILVT GRDEAIDKII GLEMGADDYV TKPFELRELL VRVKNLLWRM
SLVKKAEQAV VEQLDQKDDE IAFDNYVLEL NSRKLRRGDE LIKLTKAEFE LLAAFALHPQ
QVLSRERLMQ QTSHRNQDVN DRTIDVIIRR LRNKLDADLF VTVHGEGYLF SATVSG
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