Gene Ssed_3362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_3362 
Symbol 
ID5609737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp4090978 
End bp4091229 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content46% 
IMG OID640934300 
Producthypothetical protein 
Protein accessionYP_001475094 
Protein GI157376494 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTGCC GTTTTTGCAA CACATCTGTG TTTAAAGAGA AGATTGGTCG TTGTAAAACC 
TGTATGTGGC AGCTCACCAT ACTGTCTTTG ATTAGCTGGC CGTTATGGTT CAGCTTCTAT
TATGAGCAGC CCTTAGTCGT CGAATCTATC GCCTTGCTGT TTTTCTGTGT GAGCTTTTCG
GGGTTACTGC TATTGCACCT GCTGGTGTGG GCGTATCGAC ATTTCATTTT GGGTGAGCGG
GAGCTTAAAT AA
 
Protein sequence
MGCRFCNTSV FKEKIGRCKT CMWQLTILSL ISWPLWFSFY YEQPLVVESI ALLFFCVSFS 
GLLLLHLLVW AYRHFILGER ELK