| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3341 |
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| Symbol | |
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| ID | 5612429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4061866 |
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| End bp | 4062708 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640934279 |
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| Product | putative signal transduction protein |
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| Protein accession | YP_001475073 |
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| Protein GI | 157376473 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1639] Predicted signal transduction protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTACTG AACATCAACT ATTGGTCGGG CTTTTAAAGA AATTAAAGGC TGATTCCTTA
GTGCTGCCTA CGTTACCTGA GGTCGCGATG AGAGTTCAGG AGGTCGTTTC CAGACCCGAT
TCGAGTCCTA AACAAGTTGC TGAGATCATA GGTCAGGATG CCGCGATTTC GGCAAGAATG
ATTAAAGTGG CTAATAGTGC CCTGTACAGC CGTGGTGTGA AAGCCGAAAA CGTCAACAGT
GCGGTCACCA GAATCGGATT AACTCAGATT AAAGCGATTG CGACCTCTGT TGCTATGGAG
CAGTTGTTTA TCTCGACCAA TGAGATGGTG TGGGAGGTGA TGGATGAAGT CTGGACCTGC
TCTATCGAAG TGACTTCGGC GGCCTGTGCC ATGTTACAGA TCTATAATAA GGCTCATAGG
GGCAGTGGAC TTAACTTTGA CACCCTGACA TTAGCGGGCT TGGTTCATAA TATTGGCGCC
TTGCCAGTGC TCACCGAGGC GGAGTCTCAG CCTGAGTTGT TTACCAGTAT CGTTCAACTT
AGGGCACTAG TGCGAAAGAT GCAGGGGCCG ATAGGCCGTG CCGTCTTAAA AAGTTGGGAT
TTTGCCCCGG AAGTGATGGA AGTTGTCGAA AGATGGTCGG ATCTTCATTA TCTTCCTGAT
AATGTCGGTT ATCTAGACTT TGTTCGCGCC GCCGCATTTT ATACCGGTGA GTTAAGGTCT
GGAGCGGAGC TCGAAGAGCG GTTGGATGTA TTTGCACAAC GTGGGCTGCC GGTTTCTGCC
GAAGAGTTGG CCGGTGATGA GTTTCTTGAT AAATACCACT CTATTAAACT GAGTTATGAG
TAG
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| Protein sequence | MSTEHQLLVG LLKKLKADSL VLPTLPEVAM RVQEVVSRPD SSPKQVAEII GQDAAISARM
IKVANSALYS RGVKAENVNS AVTRIGLTQI KAIATSVAME QLFISTNEMV WEVMDEVWTC
SIEVTSAACA MLQIYNKAHR GSGLNFDTLT LAGLVHNIGA LPVLTEAESQ PELFTSIVQL
RALVRKMQGP IGRAVLKSWD FAPEVMEVVE RWSDLHYLPD NVGYLDFVRA AAFYTGELRS
GAELEERLDV FAQRGLPVSA EELAGDEFLD KYHSIKLSYE
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