| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3339 |
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| Symbol | |
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| ID | 5609796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4059809 |
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| End bp | 4060255 |
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| Gene Length | 447 bp |
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| Protein Length | 148 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640934277 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001475071 |
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| Protein GI | 157376471 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0824] Predicted thioesterase |
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| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAAACA CTAAAGAGAT GAATTACAGC TCAACATTTC ACTTTCCGGT ACAGATCTAT
TACGAAGATA CAGACTTTTC CGGTGTGGTT TACCACCCCA ATTTTCTGAA GTATTTTGAA
CGGGCAAGAG AACATGTCAT CGGCGCCGAT ATTCTTTCGG CGTTGTGGCA AGAGGATGGT
CTGGGGTTTG CGGTATATCG AAGCGATATG TTATGTCATG ACGGTGTAGA ATTTGCCGAT
ATTATCGATG TTCGAACCCG CTTCTACTTC GAAAGCAAAT ACAGGACGGT TTGGAAACAG
GAAATTTGGC GTCCCAATGC TAAGAAACCT GCGGTTACCG CTCAAATCGA GATGGTCTGT
ATGAATAAGG CCCGTCAGCT TGCCCCCATG TCGGCAGATT TAATCGAGCG GCTCAGTCAG
TCTTTCGACT CACCGGCACT TTCATAG
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| Protein sequence | MQNTKEMNYS STFHFPVQIY YEDTDFSGVV YHPNFLKYFE RAREHVIGAD ILSALWQEDG
LGFAVYRSDM LCHDGVEFAD IIDVRTRFYF ESKYRTVWKQ EIWRPNAKKP AVTAQIEMVC
MNKARQLAPM SADLIERLSQ SFDSPALS
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