Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_3335 |
Symbol | |
ID | 5609609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 4052708 |
End bp | 4054099 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640934273 |
Product | hypothetical protein |
Protein accession | YP_001475067 |
Protein GI | 157376467 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000697045 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTAC TGAAAACAGC AGCTGCGGCT GCAATATCAA TGGCGTTATT AGCTGGATGT AATGACGAAA CTAACAACAT CTATCCACCA GAGCCAACCG AACCAACGAA CGTTCGTTTC GCGACATACA ACCTCTCTTT CGATCGTTAT ACCTTTGAAG ACCTTGTCAC TGAAATGCAG TTCTCTGCAC CAGAGCAAGA AGCCTTGATG ACCAAATGGT TTGAAGATGA ACTAACTGAA GATGAATTAA AAGTTATCGA AAAAATCATT CAGATCCGTA ACGTTGCAGC CGTAATTCAA ACTGAGCGTC CAGCGGTATT GATGATGGGT GAGTTTAACA ACGATGGCCT GGGCGAGAAC CAGGATGCAA TTAATGGCTT CCGTTTAAAC TATCTTGCAG TGCCACAAAA TGGTCTGGGC ACAACCTCTG ATGAGAAGAA GATGTTAGAG CCAATTCAGT TTGCTTATAC TGAGAACTTC TCAACAAATA CAGGCCTGTT AAGTGAATTT GATCTAGACC GTAATGGTAC TGTCGCACTT CCTGGCGATG CTTGGGGCTA TGGTAACTAC CACGGACAGT ATGCATTTGG CCTACTATCA CAGTACCCAA TTGATACAGA TAACATCCGT ACTTTCCAAG ACTTTAAGTG GAAAGATATG CCTGGCGAAA CTAACCCTGT GATCACTGTT TGTGATAATC CAGACAAGCC TATTCCTGAT GGATTAGCGT GTGGAGATGA GTGGTACACA GCCGAAGCAT GGGCACAGAA GCCACTTTCT TCTAAAAACC ATGTCGATGC GCCAATTCTT ATCCCAACCG CCGATGGTGA GAAAGTTGTT CACCTACTAC TATCTCACCC AACACCACCA GTGTTCGATT ACATCACTGA AAACAACAAG TTGTTAAACA GTGCTGAGAT CAAATTCTGG AGTGAATATG TATCAAATGC CGACTACATC TACGATGATG CTGGCGTTAA AGGTGGTTTA GGTTTGGATG CATCTTTCGT GGTTATGGGC GATCTTAACG CCGACCCTGA AAATGGTGAT GGCTTTCTGG AGTCAATTCA GGATCTAATG AATCATGAGC GTGTAAACGT GCTTGCTACA GATGGTGTTT ACGCGCCAAA CAGCCTGGGT TCAACTGAGT GTGTTGCACT TGGTGATTGT GGTGATAGCA TCTACCCCGA TCGTATTACC AGTACCTTTG GACTACGTGT CGATCACGCT ATCCCATCAA ATGATCTAAA CATCATCGAC TCAGGCGTAT TCTGGCCGGC AACCTTCGAA GAAGGTCGTT TATTGATGAA CGATGAGCGT GTAGGGAAAT GGGGTAACGG TAAAGATATC TCTTCCGATC ACCGCCTGGT ATGGATTGAA GCAGAGCTTT AA
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Protein sequence | MKLLKTAAAA AISMALLAGC NDETNNIYPP EPTEPTNVRF ATYNLSFDRY TFEDLVTEMQ FSAPEQEALM TKWFEDELTE DELKVIEKII QIRNVAAVIQ TERPAVLMMG EFNNDGLGEN QDAINGFRLN YLAVPQNGLG TTSDEKKMLE PIQFAYTENF STNTGLLSEF DLDRNGTVAL PGDAWGYGNY HGQYAFGLLS QYPIDTDNIR TFQDFKWKDM PGETNPVITV CDNPDKPIPD GLACGDEWYT AEAWAQKPLS SKNHVDAPIL IPTADGEKVV HLLLSHPTPP VFDYITENNK LLNSAEIKFW SEYVSNADYI YDDAGVKGGL GLDASFVVMG DLNADPENGD GFLESIQDLM NHERVNVLAT DGVYAPNSLG STECVALGDC GDSIYPDRIT STFGLRVDHA IPSNDLNIID SGVFWPATFE EGRLLMNDER VGKWGNGKDI SSDHRLVWIE AEL
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