| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3334 |
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| Symbol | |
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| ID | 5609608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4051333 |
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| End bp | 4052388 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640934272 |
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| Product | cobalamin synthesis protein, P47K |
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| Protein accession | YP_001475066 |
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| Protein GI | 157376466 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0523] Putative GTPases (G3E family) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00186258 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAATCA AACCTATCGC TACCAATGTG ATCACAGGCT TTCTGGGGGT TGGAAAGACC
AGCTTTATTA AGCAGCTTTT CCTGAGTAAA CCCGCCGATG AAAAGTGGGC CGTGTTGATC
AACGAATTTG GTGAGGTAGG CATAGACGCG GCTTTACTTG GAGGTGGCGA GAAGGCTATC
GAGATCCGGG AAGTCGCTGG CGGATGTATG TGCTGCGCGG CTGGTGTGCC TATGCAGGTG
GCGATAAATC AGTTGATAGC TAAAGCTAAA CCCGACCGGT TATTGATCGA ACCTACGGGG
CTTGGGCACC CCAGAGAGGT GCTTAAGGTA CTCAGTGAGC CTCATTACCA CAATATCATC
GACCTAAAGT CGACAGTTTG CCTGGTCGAT GCCAGAAAAA TTGAGGATGC CCGATATCGG
GAGCATGAGA TCTTTAATCA GCAACTGGAA GTTGCGGATA TTGTGCTGGC GGCTAAATCA
GATCTCTACT CAGAGCAAAG CTATACAAAT TTAGTCTCAT TTCTTGAGCA GAACCATAGA
AGCTATGAGT CCGAGCATGG CGTATTGATG CAGATGAGTA TAGAGCAATC TCAATCGACG
GGGCTGTCCG GTGAGTTACT TGACCTGTTA GACAGGAAAG CGCAGATTCC TGCGCCTACC
GCCGGAACCA AACAGAGCAT GCTCAGGCCT CAAGCCCATG ACCTGTTTGC TCTCGAACCA
TCGGTTATCG AGAGTGAGTT TAATGAGGTC GGTCTGATAA AAAAGCTCAA TAAGGGAGAG
GGGTTTTATA GTTGTGGTTG GATATTCGAT CTCAGTTATG AGTTTTTATT CGATGAGGTC
ATTAGTCTGG TGAAGTCGTT GGATGTGACT CGGCTTAAGG CGGTATTGAT CACCGATGAG
GGGATAGCCG GGCTTAATTT AATTGATGGT GAACTCAGTG TTATCGAACT CGATGATGTG
ATGGACTCGA GAATAGAGAT TATTACGTTA ACTTCAGCCG ATAGCGAGGC GCTGGAGAAG
AGGCTGCTCG CTATATCTAA GCGGTTAAGT TTTTGA
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| Protein sequence | MIIKPIATNV ITGFLGVGKT SFIKQLFLSK PADEKWAVLI NEFGEVGIDA ALLGGGEKAI
EIREVAGGCM CCAAGVPMQV AINQLIAKAK PDRLLIEPTG LGHPREVLKV LSEPHYHNII
DLKSTVCLVD ARKIEDARYR EHEIFNQQLE VADIVLAAKS DLYSEQSYTN LVSFLEQNHR
SYESEHGVLM QMSIEQSQST GLSGELLDLL DRKAQIPAPT AGTKQSMLRP QAHDLFALEP
SVIESEFNEV GLIKKLNKGE GFYSCGWIFD LSYEFLFDEV ISLVKSLDVT RLKAVLITDE
GIAGLNLIDG ELSVIELDDV MDSRIEIITL TSADSEALEK RLLAISKRLS F
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