| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3321 |
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| Symbol | |
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| ID | 5610483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4037847 |
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| End bp | 4038521 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640934259 |
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| Product | dienelactone hydrolase |
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| Protein accession | YP_001475053 |
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| Protein GI | 157376453 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3571] Predicted hydrolase of the alpha/beta-hydrolase fold |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000206123 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.978239 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGCTACT TCCTGGTTAA AGCGTCTCTG GAAGCGCAAG AATTGCTCCA GAGTGAGTGT
GTAATAGAGG GTGACGTGAA TGGAACTGTC GTCATATTTA CTCACGGAGC CGGGGCAAAT
ATGCAATCTG ACTTTATGGT TGAGATGACA AAGGGGTTAT CGAATGCAGG CTTTGGGGTG
GTACGTTTTA ATTTTCCCTA TATGCGTGCC AATGCCATTG ATGGTAAACG TCGACCACCC
GATCGAGCCC CTAAGCTGAT TAAAGACTTC AATCTGCATA TCGAGGCGAT TAAAGCTGAG
TACTCCCCAA AGCGAATTAT TCTGATGGGA AAATCGATGG GAGGACGCAT GGCTGCCATT
GTTGCCGGGG ACACCAATGT CGATGGTGTT ATCTGTCTCG GGTACCCCTT TATTCCATTG
AAGGGAGGGG AGCCAAGGCT GGAGCCCATA GAGAACAGCA AGGCACCTAT CTGTGTCATT
CAAGGTGAGA GAGACAAATT TGGCGGCAAA GGTTTAGTCG ATACCTGGCC TGTGATGAAT
AAGGTGAGCC TGCATTGGTT AACGGATGGC GATCATAGTT TTGCACCAAG AAAGTCGTCA
GGTACGACGC AAGGAGCTAA CCTAGCCACT GCGATCACAC ATTGTACTGA TTTTATTCGG
GGGTTAGATG CGTAA
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| Protein sequence | MSYFLVKASL EAQELLQSEC VIEGDVNGTV VIFTHGAGAN MQSDFMVEMT KGLSNAGFGV
VRFNFPYMRA NAIDGKRRPP DRAPKLIKDF NLHIEAIKAE YSPKRIILMG KSMGGRMAAI
VAGDTNVDGV ICLGYPFIPL KGGEPRLEPI ENSKAPICVI QGERDKFGGK GLVDTWPVMN
KVSLHWLTDG DHSFAPRKSS GTTQGANLAT AITHCTDFIR GLDA
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