Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_3317 |
Symbol | |
ID | 5614141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 4031879 |
End bp | 4034752 |
Gene Length | 2874 bp |
Protein Length | 957 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640934255 |
Product | peptidase S9 prolyl oligopeptidase |
Protein accession | YP_001475049 |
Protein GI | 157376449 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.13719 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCTT GGGTTTACGT TAATAAAATA AGAAAAATGA GGAAGACCTT GAAGTCACTA CCCATAGCAT CTTTTATTCT TGCATCGGCG AGCCTGCTCA CTGCCGGAGC CTACGCTTCA TCCCCCTCCA ACTCTCATTC AATCGTGCCT GATGACATTA TGCATTTTGA ATCATTGAAG AAACCTGTGG TTTCAGATTC CGGCACTATG TTGGCCGTCG AGGTGGCTCC CGATCGGGGT GATAGTCATG GACTGGTTAA GAGTCTGACA TCGTCCAAAA AGTTTACTGT AGATGGCGGT TCTAAGCCTA AAGTGAGCCG AGACGGCCGT TTTGTTGCTT TTGTTGTGAA AAATTCGTTA CTCGATTCTG AGATGGCATC TGCCAAAGAG AAGAAAAAAC TCAAATCCGG CATGGTGTTA CTCGACACTA CATCCGGAAT AGAAACGCGT TTTGAAAGAG TTAAAACGTT TGAGTTTAAT GAAACCGGAA CACACTTAGC CGTTTGGTTT GAAGCCGAAG AGAAAGAGGG TGATAGTAAA AAAACCGATA AAAACGCCGA CAGTAAGAAA AAAGAGCAGA AAAGTAAGCA GGAAAAAGTT GATAAGTTCG ATAAGGGAAC CGAGTTTCAG CTTATCTCAC TTAAAAATGG CTATAAGCAA AGCGTTAAAA ATGTGACCCG CTTCTATTTT GATAAAGTAG GTAAGCATCT GGTGCTGGCA AGCAATGATG TGAAATTGAA AAAGCATCAA CTGGTATCAA TAAAACTCAA TAGCAACGAA AAAGAGATTG TACGTCAGTA CAGTGACCAA CAGATTGGTG AGGTATCGCT GAGTGAAGAC GGCCGATACA TCGCCTTCAC CCACGGCGTG GCAGCAAGTG CACCCTATGG GCGTGAATAT AAGTTGTCTC TGCTTGAGAT AGCAACCGGA GTCGTTAAAC CTGCACCCGT TAATGATGAG TGGAAACTTA ATCGTTATAC CACATTGAGA TTTTCACAAG ACAGTAACCG ACTCTTTTTT GGACGGGTTC CCCATGTGAG CCAACAGCTT GAGATCAAAA AGATTGAGAA CCAAGCCGAC CTCTTTAACG AAAAGATAGT CACAGGTCAG CGTGAGCTGC GTATCTGGCA CGGTGATGAC GCACGTATTA AGCCCAATGA GGTAAAACAG TACAAGAAGG AGCAGGAACG GACCTATTTG GCCGTTTTAC ATCTGCAGGG AAACAACCTT GTGCAGTTAG CCGATGAAGC TGTACCGGAC ATTGAGCTGC AGGAGCAGTC ACGATTCGTT ATTGCCAGCT CGGATATTCC CTATCGTAAG ATGATCACCT GGGCCGGTTT TTATCGGGAC TATTATCTGG TCGATCTTAA TACGGGTCGC AAAATTCCAT TCTTGACTCA GCAGCCCACA AATGAAGCGC CAAACCTCTC TCCTAAGGAG CGATTTGTCT CTTACTACCA GCAAGGGCAA GTGTATCTCT ATCAGATTTC CCAAGATCGC AGACATAATC TAACCAAAGA TTTGAAGGTC TCTTTTGCCG ATGAGGACCA TGATTATCCC TCTAATGCCC CTGGATATGG CTTTGGCCCC TGGCTAGAGA ATGATGCCGG TCTATTGGTT TATGATAAAT ATGATATCTG GCAGATGAAT ACAGAATCTC TGGAGGCGTT CAAGCTTACG GCGGGTAAAG GACGTAAGCA GGGGATCCAA TATCGAGTCA CCGGCTTAGT GGAGGATGAG AATAGCCCCG ATCTCTTTGC TATCGATCAG CAGGTGCTGC TCCATGGCTA TAACGAGAAG ACCAAAGGTG ACGGTTATTA TCAGGCAAAA ATTGGTGTCT CCGGTGTGAC AACCTTGATG GAGGGGGATT ATAAGATAAA ACCTCTCGCA CGCAGCAAAG ATTCCAATAC CTTAGTGTTC TCGAAAGAGC GCTTCGACCT GTTTCCGGAT CTCTATACCG CAGAGTACTC AGCGCCACAG GCAGCGACCC GTCAAACCGA CTTGGATGCT CAGAAGCGTA AATTTAATTG GAGTCAGTCT GAGCTGGTTC ACTGGACCAA TGGTGATGGA CAGCCGTTAG ATGGTGTGTT GATTAAGCCG ACAAACTATG AAGAGGGCAA GCGCTATCCG GTACTGGTCT ATTTCTACCG TTTTATGAGT GACCGCTTGC ATGCCTTTCC CCAGATGAAA CTCAACCATA GACCTAACTT TGCCTGGTAC GCCGATAACG GTTATGCCAT CTTCCTGCCG GATATTCGTT TCGAGGTGGG TTATCCCGGT GCAACCTCTG TTCAGGCATT GACGTCCGGT GTGCAGAAGT TGATCGAAAT GGGTATCGCA GACCCCGATG CTGTCGGGAT CCAGGGACAC TCCTGGGGCG GTTATCAAAC AGCCTTTGCC GTCACGCAGA CTCATATCTT TAAGGCTGCG GTAACCGGGG CTCCGGTCTC TAACATGACC AGCGCCTATA GCGGGATCCG TCATGGTAGT GGTTTGGCTC GTCAGTTCCA GTATGAAACC GGACAGAGCC GAATTGGTGA GAGCCTGTTC AGAGCGCCGC AGAAGTATAT TGAGAATTCG CCTGTTTTCT ATGCTGAACG TATCAAGACG CCTATGATGA TCATGTTTGG CGATAAAGAC GATGCGGTGC CTTGGGAGCA GGGAATAGAG CTTTATCTCG CCATGCGCCG TGCGGGTAAA GATGTGGTCT TTTTGCAATA TCAAGATGAA CCACATCACT TGAAGAAGTA TCCGAATAAG CTCGATTACA GCATTCGTAT GATGGAGTAC TTCGACCACT ATCTGAAGGG CAAACCCGCA CCTGCCTGGT TAACTCAGGG CGAGGCATAT ACCGAATATA AGAAGGCCGA CTAA
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Protein sequence | MKAWVYVNKI RKMRKTLKSL PIASFILASA SLLTAGAYAS SPSNSHSIVP DDIMHFESLK KPVVSDSGTM LAVEVAPDRG DSHGLVKSLT SSKKFTVDGG SKPKVSRDGR FVAFVVKNSL LDSEMASAKE KKKLKSGMVL LDTTSGIETR FERVKTFEFN ETGTHLAVWF EAEEKEGDSK KTDKNADSKK KEQKSKQEKV DKFDKGTEFQ LISLKNGYKQ SVKNVTRFYF DKVGKHLVLA SNDVKLKKHQ LVSIKLNSNE KEIVRQYSDQ QIGEVSLSED GRYIAFTHGV AASAPYGREY KLSLLEIATG VVKPAPVNDE WKLNRYTTLR FSQDSNRLFF GRVPHVSQQL EIKKIENQAD LFNEKIVTGQ RELRIWHGDD ARIKPNEVKQ YKKEQERTYL AVLHLQGNNL VQLADEAVPD IELQEQSRFV IASSDIPYRK MITWAGFYRD YYLVDLNTGR KIPFLTQQPT NEAPNLSPKE RFVSYYQQGQ VYLYQISQDR RHNLTKDLKV SFADEDHDYP SNAPGYGFGP WLENDAGLLV YDKYDIWQMN TESLEAFKLT AGKGRKQGIQ YRVTGLVEDE NSPDLFAIDQ QVLLHGYNEK TKGDGYYQAK IGVSGVTTLM EGDYKIKPLA RSKDSNTLVF SKERFDLFPD LYTAEYSAPQ AATRQTDLDA QKRKFNWSQS ELVHWTNGDG QPLDGVLIKP TNYEEGKRYP VLVYFYRFMS DRLHAFPQMK LNHRPNFAWY ADNGYAIFLP DIRFEVGYPG ATSVQALTSG VQKLIEMGIA DPDAVGIQGH SWGGYQTAFA VTQTHIFKAA VTGAPVSNMT SAYSGIRHGS GLARQFQYET GQSRIGESLF RAPQKYIENS PVFYAERIKT PMMIMFGDKD DAVPWEQGIE LYLAMRRAGK DVVFLQYQDE PHHLKKYPNK LDYSIRMMEY FDHYLKGKPA PAWLTQGEAY TEYKKAD
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