| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3314 |
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| Symbol | |
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| ID | 5614138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4029964 |
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| End bp | 4030563 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640934252 |
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| Product | ribosomal-protein-alanine acetyltransferase |
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| Protein accession | YP_001475046 |
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| Protein GI | 157376446 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0216774 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTACGA TTCCAAGAGT TAAGACAAAG CGAACCATGC TGACTATTTT GCAGTATTAT
GAATATCAGC TATTAATCGA TTATTACCAG AAAAATAGCG CCCATTTAGC GCCTTGGGAA
CCAGAAAGGG ATCCTGATTA TTTCAATCCC ACGAAGGTAA AGCGGAGGCT ACTTGAGAGT
AATGAGCTGT TTGCGGTGGG CGGAGCGGTG CACTTCGTTG CGTTTGCATT AGATGAGCAA
GCCTGTTCCG GTAGCGACGA GAACCGCAGT GAGATTATTG GTGTTTGTAA TTTTACCAAT
GTTATCAAAG GCTCCTTTCA GGCCTGCAAC TTAGGTTACT CCATTGCCGG GGAGCATCAA
GGCAAAGGCT TAATGAAAGA GATCTTAACG GCTGGGGTCG ACTATATTTT CAGTGAGCTT
AACCTGCACA GAGTTATGGC TAACTATATT CCTTCTAATA CACGTAGCGG CCAACTGCTC
TCATCACTGG GGTTTGAAGA GGAGGGACTG GCGAAGTCTT ATCTTAAGAT CGCCGGACAG
TGGCAGGACC ATCGACTGAC ATCGAAGATA AACCCAGAGT ACTCAGAAAC AGCACCGTGA
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| Protein sequence | MFTIPRVKTK RTMLTILQYY EYQLLIDYYQ KNSAHLAPWE PERDPDYFNP TKVKRRLLES
NELFAVGGAV HFVAFALDEQ ACSGSDENRS EIIGVCNFTN VIKGSFQACN LGYSIAGEHQ
GKGLMKEILT AGVDYIFSEL NLHRVMANYI PSNTRSGQLL SSLGFEEEGL AKSYLKIAGQ
WQDHRLTSKI NPEYSETAP
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