| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3306 |
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| Symbol | rdgC |
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| ID | 5610837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4018647 |
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| End bp | 4019558 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640934244 |
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| Product | recombination associated protein |
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| Protein accession | YP_001475038 |
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| Protein GI | 157376438 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2974] DNA recombination-dependent growth factor C |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00154352 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000264901 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTGGTTTA AAAATCTGAC TGTTTACCGT TTTAATAAAC CTTTCTCTGT TGATACAGAA
GCTCTTGAAA AGTCATTGGA AGACTTCACA TTCTCTCCAT GCTCAAGCCA AGACATCAGC
AAGTTCGGTT TTTCCAATGC ACTTGGAAAA CAAGGCCAAA CACTGGTACA CAGTGCCAGT
GAAAGACACC TTATCTGTGC AACAAAGGAA GAGAAGATCC TTCCTTCACA GGTGATAAAA
GAAGCACTCG AAGATAAAGT TGCTCAAATT GAAGCCGAGG AAGATCGCAA ACTGGCAAAG
AAAGAGAAAG ATGCAATGAA AGAGGAGATC GTCATGACTC TGCTTCCTCG TGCATTCACT
CGCCGCAGTC AGATCCGCGC ACTGATCATT CCGGAAATTG AGATGATTCT CGTCGATAGC
TCAAGTGCTG CTAAGTCAGA AGAGTTACTG GCTCTGCTAC GTAAAGCCCT GGGCTCACTT
CCTATCATTC CGTTAAGTTT TAAGACCCCA ATCGAGACTC AGTTAACCGA ATGGTTAAAA
GGAAACTCGA CTCCGGCTCC TTTTATCATG CAGGATGAAG CCGAACTTAA AACTGACTCC
GATGAGGGCG GCATCGTTCG CTTTAAGCAA CAAGACCTCA CCGAAGATGA AGTGCTCGCT
CACATTGAAG TGGGTAAGCA GGTTCACAAG CTGGCTCTGT ATTTCGGCCA GTCTATCGCC
TTCCTGCTGC AGTCTGATGC CGGGATTAAA CGTTTAAAGT TCTCTGAAGA GTTCAGAGCG
GGCAACGATG AGGTCGGCAC TGAAGATCCT ATGGCGCGCT TAGATGCAGA CTTTGCCTTA
ATGGGCAGTG AGCTTATCGC CTTGATGAAC TCATTAGTCG AAGTGCTCGG CGGTGTAGAA
GACAGCATTT AA
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| Protein sequence | MWFKNLTVYR FNKPFSVDTE ALEKSLEDFT FSPCSSQDIS KFGFSNALGK QGQTLVHSAS
ERHLICATKE EKILPSQVIK EALEDKVAQI EAEEDRKLAK KEKDAMKEEI VMTLLPRAFT
RRSQIRALII PEIEMILVDS SSAAKSEELL ALLRKALGSL PIIPLSFKTP IETQLTEWLK
GNSTPAPFIM QDEAELKTDS DEGGIVRFKQ QDLTEDEVLA HIEVGKQVHK LALYFGQSIA
FLLQSDAGIK RLKFSEEFRA GNDEVGTEDP MARLDADFAL MGSELIALMN SLVEVLGGVE
DSI
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