| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3285 |
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| Symbol | |
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| ID | 5610033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3988497 |
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| End bp | 3989231 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640934223 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475017 |
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| Protein GI | 157376417 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3821] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000047604 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTTTTA CCGTTTTGGA TCTCATCTCT TTAATCTGTT TTATCTGTTG CTGGGTCGGC
TACACCTCCT TTGCACGTCG TAAAGCCAAG ACCACCAACT GTATCGCTCG TTGTCTGCAT
CAACATCGAA TTCATTGGAT GAACGAGTTG ATGACCCGTG AGGTGAGAGT CGGTGAAGCG
GCACTTCTGG CCAATCTTGA ACGTAATATT ACCTTCTTTG CCTCGACTAC CATGCTGATC
CTTGCCGGTG TGCTAACGTT ATTTGCTCAG GTTGAGCGCT TAGAGGCTGT GATTGCGTCA
ATCCCCTATA CGGCGACCCC TAACGATGCC TTGATCCAGC TGAAATTAAG CTTATTGACC
TTTATCTTCG TGATGGCCTT TTTCCAGTTT ACCTGGTCGA TGCGTCAATA TGGTTTTCTC
AATGTGATGG TCGGCGCCGC ACCCATCGAC CCAACGGGTG GCGGGGATGA CAGACTTCGC
TGCTATGCAA AACAGATGGC GATAGTGCAA GATCAAGCGG CGCACTCATA CAATTATGGA
CTCAGGGCCT ATTATTTTGC TATGGCGGTC TTGAGCTGGT TTTTCCATCC GGCCCTGTTC
ATCGTAACCA GTCTGTTTGT GGTCTATACC TTGTATGCTC GGGAATTTAA CTCTAAGGCC
GTGGTGGCCA TTACATCCGG AATGCAGGTG TTGAATGAGC AGGAAGATAA GAAAAAAGCT
TCCCGGCTCA AGTGA
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| Protein sequence | MAFTVLDLIS LICFICCWVG YTSFARRKAK TTNCIARCLH QHRIHWMNEL MTREVRVGEA
ALLANLERNI TFFASTTMLI LAGVLTLFAQ VERLEAVIAS IPYTATPNDA LIQLKLSLLT
FIFVMAFFQF TWSMRQYGFL NVMVGAAPID PTGGGDDRLR CYAKQMAIVQ DQAAHSYNYG
LRAYYFAMAV LSWFFHPALF IVTSLFVVYT LYAREFNSKA VVAITSGMQV LNEQEDKKKA
SRLK
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