| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3281 |
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| Symbol | |
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| ID | 5610447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3982772 |
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| End bp | 3984223 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640934219 |
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| Product | sensor histidine kinase |
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| Protein accession | YP_001475013 |
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| Protein GI | 157376413 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00282133 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000112665 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTAACT ATCTTCCCCC ACTGTTTACC CGACTCTACG TCAGCATGAT TGTGGCCTTG
TGTGCCAGCA TCTTTGTCAC TCTCTATTTT AGTGAACAGT TTATTGAACA GAGCGATACC
GTCGATTTTT ATGAGGATAC CTATTACGTC TTCACTGAAA TTAAGTCTGA CCTGAACCGC
TCAGGTTTAA CTCCAGAGCA GTACTTCAAC GATATGCTGC TTAATCATTA CCATTTCAAC
ATTGAATGGC AGAAGCAGTG GCAGGATAAA GCAGAGTGTG GGGAGTGTGA ATTTCTCAAT
AAGATAGCCG GCTCATTCAT CTATAGACTT AATGATGAGC AACTGCTCGC AGCCTATCCC
CTCGATGGTA CCAAGGGTGC CATATTAATC GGCGACCAGG CTCCCGCCAG CCTACTTTTT
GAAAATAATG ATGGAAAACA GCCATTAACT CTTGCTGAAA TATGGCACGA AGACCCCGGA
GAGTTAATCC CCTTTATTCT ACTTATCGTT ACAGCCTTAG CCATTGGTGC CACTCTCTAC
TATCCGGTGC GTCAACTGCA GAAACAGATC AACCAGCTTA TCGATACCAA CCAAAAGTTT
GGTAATGGTG AGCTTAATGC CCGGGCCGAA CAAGCGTTTT CCGAGCCGGT GAATTCACTG
GCGATCAGCT TTAACCGCAT GGCAGAATCG ATAACCGAAA CGGTGAAAGA AAATCAAATC
TTCGCACAAG CCGTGCCCCA TGAGATGCGC ACGCCCTTGA GTCGAATTCA GTTAGCAACC
GGATTACTTC GTAAGCGCTG TCAGCAAGCT GACGAGCGGG AACTGCTCGA TAACATCGAC
TGTTATATCG ACGACATCGA TGAGTTAACC CGGCAGGTGC TCACCTTCTC TAAACTCAAC
ACCACACTAA GTCAGGAAGA GTGCCTGAAA GCGTGCCAGA GCAAGCAGCT CATCAACCTC
GATGAATATT TTAAAAGCCG AGTGCAGCTG TTAAACCAGA AACAACAGTT AGACCAAGAT
CAGGCTATAG ACGTCACGTT AGATATGGAG CCACAGCAAC TCGAATGTGA CCCGGTTTAT
CTGCGTTTGA TGTTCGATAA CCTGCTCAAG AATGCGCTCA GATACGCGAC ATCCAGAGTC
CTGGTAACAG TGGCAGTCGG TGGACACGAA AAACATGACG AAGAGAGTCA TCTTGTTATT
AGCGTCGATG ATGATGGCCC CGGTATCGAG AGCCAACATT ATGACTCAAT CTTCCTGCCT
TTCTCCCGTA TAGACAGGAG CCGCAGTCAG CAAACCGGCG GCCTTGGCTT AGGTTTGGCC
ATAGCTAAAG CCGCAACGAG GCGAATGCAT GGCCACTTAG AGGTGAGTCG CAGCGAGTTG
GGCGGAGCCA GGTTCAGTTG CCGGTTAAGC CCAGTTAGGC TCGCTATGAA GAACTGTTCC
GGTACGGGTT AA
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| Protein sequence | MANYLPPLFT RLYVSMIVAL CASIFVTLYF SEQFIEQSDT VDFYEDTYYV FTEIKSDLNR
SGLTPEQYFN DMLLNHYHFN IEWQKQWQDK AECGECEFLN KIAGSFIYRL NDEQLLAAYP
LDGTKGAILI GDQAPASLLF ENNDGKQPLT LAEIWHEDPG ELIPFILLIV TALAIGATLY
YPVRQLQKQI NQLIDTNQKF GNGELNARAE QAFSEPVNSL AISFNRMAES ITETVKENQI
FAQAVPHEMR TPLSRIQLAT GLLRKRCQQA DERELLDNID CYIDDIDELT RQVLTFSKLN
TTLSQEECLK ACQSKQLINL DEYFKSRVQL LNQKQQLDQD QAIDVTLDME PQQLECDPVY
LRLMFDNLLK NALRYATSRV LVTVAVGGHE KHDEESHLVI SVDDDGPGIE SQHYDSIFLP
FSRIDRSRSQ QTGGLGLGLA IAKAATRRMH GHLEVSRSEL GGARFSCRLS PVRLAMKNCS
GTG
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