Gene Ssed_3267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_3267 
Symbol 
ID5613225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3967151 
End bp3967474 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content45% 
IMG OID640934205 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001474999 
Protein GI157376399 
COG category[C] Energy production and conversion 
COG ID[COG1146] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.233351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.575055 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTCG TTGTCACAGA TAACTGCATA AGATGTAAAT ACACCGACTG CGTAGCAGTT 
TGTCCCGTCG ATGCATTCCA TGAAGGGCCT AATTTTTTAG CCATCAATCC AGAAGTGTGT
ATCGATTGCG ACCTTTGTGT CCCCGAATGC GCGGCTCAAG CTATCTTTCA AGAAGATGAC
CTACCCGAAG GGATGGAGCA ATATCTCGAA CTCAATGCCG AACTTGCTCA AATTTGGCCC
GTGATCACTG AGGTAAAAGA GGCTCCGGCT GATGCAGAAG AATGGGATGG CGTTAAAAAT
AAAAGAGAGC ACTTAATCAT TTAG
 
Protein sequence
MAFVVTDNCI RCKYTDCVAV CPVDAFHEGP NFLAINPEVC IDCDLCVPEC AAQAIFQEDD 
LPEGMEQYLE LNAELAQIWP VITEVKEAPA DAEEWDGVKN KREHLII