Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_3267 |
Symbol | |
ID | 5613225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 3967151 |
End bp | 3967474 |
Gene Length | 324 bp |
Protein Length | 107 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640934205 |
Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
Protein accession | YP_001474999 |
Protein GI | 157376399 |
COG category | [C] Energy production and conversion |
COG ID | [COG1146] Ferredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.233351 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.575055 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTTCG TTGTCACAGA TAACTGCATA AGATGTAAAT ACACCGACTG CGTAGCAGTT TGTCCCGTCG ATGCATTCCA TGAAGGGCCT AATTTTTTAG CCATCAATCC AGAAGTGTGT ATCGATTGCG ACCTTTGTGT CCCCGAATGC GCGGCTCAAG CTATCTTTCA AGAAGATGAC CTACCCGAAG GGATGGAGCA ATATCTCGAA CTCAATGCCG AACTTGCTCA AATTTGGCCC GTGATCACTG AGGTAAAAGA GGCTCCGGCT GATGCAGAAG AATGGGATGG CGTTAAAAAT AAAAGAGAGC ACTTAATCAT TTAG
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Protein sequence | MAFVVTDNCI RCKYTDCVAV CPVDAFHEGP NFLAINPEVC IDCDLCVPEC AAQAIFQEDD LPEGMEQYLE LNAELAQIWP VITEVKEAPA DAEEWDGVKN KREHLII
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