| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3259 |
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| Symbol | |
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| ID | 5614188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3955327 |
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| End bp | 3956937 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640934197 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474991 |
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| Protein GI | 157376391 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAATA TAAAAGATAA ACACACACCA TATAAGAAGT TAATACTGGC TGGTATGATC
TCTATGCTGG TGGCTTGTGG TAGCGATAAC GACGATCCGC TTCCACCACC GGAAGAAAAT
AATCCACCGA TTGCTAATCC AAGCAGTGCT GAAACCACTA TAGGTACCAG TATCCTGATA
GACGCTTTGG CCAACGATAC CGATCCCGAT GGTGATCCAT TGACTATCGA AACCGTGACC
GTGACATCAG GCGCAGGAAC AGCATTGATT CAAGATAATA AAATCTTGTT CGTGTCAGAT
AAAGTCGGTG CCACAGTACT CAATTACACC ATCTCAGATG GTAATGGCGG CGAGGCAGAG
TCGACTGTCA CTGTCGTGGT GCTATCAGAT GAAGTGGCCC TGGCCTATGT CGGTACAGAT
ACTTGTATCG CCTGTCATAC GGATAAAAAA ACCTATTATG AGACTGGTCA TAACTTCAAG
CTGACTAAGG TTAATGGAGA GAAACCACTC TACCCGTTTT CCTCTATTCC TAATGGAATC
CTGGAATTTT TTGATGTAAA TAACACGCTG GGTAACCCTT CAAGCTGGGC AGATATCAGT
TACGTTATCG GTGGTTACAA AAGCAGTACC ATGTTCATCG ACCAGAATGG CTACATCATG
ACAGGGAATG CGGTTGGTAC ATTCCCTGTT CCAGAGGGGA CTGAAGCGAA TGCTCACATG
ACGTGGCCCT GGAACCCGAA TGATGCACCT GATTCACATG GCTATGATTA CTGTGGTAGA
TGTCATACCA CAGGTTGGCA AGATTACACC GAAGGAGCCG GTGATAACCG CAACCTGAAC
AGACAAGATG ATATGCCGGG TATGGGCGGT ACGTTCGCTA TGACCGGTGT TCAGTGTGAA
AGTTGCCACG GTGCCGGTAG TGAACACGTT AAGGGCCCGT CAAAACATAA TATTGTTAAA
CTAGCTGATG CACGTGTTCC TGGCGATTAC ACTGCAGATG ATATGGGATA TGGTAAGCCG
GCTACCTGTC AAGAGTGCCA TACTACCGAT GATGCCGTCA GACGCTACCC ATCCTACGAG
TCTCCCTTTG AACAGAAGTT TGGCGCAGGC ACTCTGAATG CACGCTTGAA GCGGACCTCC
GGCTTTGGCC CTGAAGGGCG CAGAGATGGC CGTGGTGGCA GACATGCTGC GACAACCTTG
ATTGGTGCCG ATCCGGATAC AGGCGTGGCT ATGGGTAAGA AGAAGGACTT CACCTGTTCA
ACCTGTCATA ACCCTCACCG GTCGGAAAAC TATCAGGATC AACCTGGTCA TGAAGACGCG
ATGGTAAGAG AGTGTACTGA CTGTCATGAC AAGGAGTTTG CCGACGTCCC TGGTAGCGAA
ATCGCTTCAG CCGCTCACGA GTTCATCGCC AAGTGTACCG ATTGCCACAT GCCTAGTGAA
TCTCACCTGC TCAAGATCGA TCTCGAGGGG GCAAAGGACG ACCCAAGACA CTTCTCTGCA
GACGGCGAGT ATATGAAACC TTGGCTTCGT GCTTATGATA GTTGTTCAGG CTGTCATGCG
GATGACTATG ACGCGCGTGC CTCGAAGATA GGACAAATTC ATAAGTATTA G
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| Protein sequence | MMNIKDKHTP YKKLILAGMI SMLVACGSDN DDPLPPPEEN NPPIANPSSA ETTIGTSILI
DALANDTDPD GDPLTIETVT VTSGAGTALI QDNKILFVSD KVGATVLNYT ISDGNGGEAE
STVTVVVLSD EVALAYVGTD TCIACHTDKK TYYETGHNFK LTKVNGEKPL YPFSSIPNGI
LEFFDVNNTL GNPSSWADIS YVIGGYKSST MFIDQNGYIM TGNAVGTFPV PEGTEANAHM
TWPWNPNDAP DSHGYDYCGR CHTTGWQDYT EGAGDNRNLN RQDDMPGMGG TFAMTGVQCE
SCHGAGSEHV KGPSKHNIVK LADARVPGDY TADDMGYGKP ATCQECHTTD DAVRRYPSYE
SPFEQKFGAG TLNARLKRTS GFGPEGRRDG RGGRHAATTL IGADPDTGVA MGKKKDFTCS
TCHNPHRSEN YQDQPGHEDA MVRECTDCHD KEFADVPGSE IASAAHEFIA KCTDCHMPSE
SHLLKIDLEG AKDDPRHFSA DGEYMKPWLR AYDSCSGCHA DDYDARASKI GQIHKY
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