| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3254 |
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| Symbol | |
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| ID | 5613720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3948375 |
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| End bp | 3949778 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640934192 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474986 |
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| Protein GI | 157376386 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCATAT CAAACACTGG ACATGGAACC GAGTTATCAC GACAATTCGC CCATCATTTA
ACTCCTGTGT TTTTATCAGT TGAAACATGG CGACTCAGCC AATGTCACTT CTCTGTTATC
TACTTCATTT ACTTTAAAAT TGTTGTCTTA ATGAATAAAA AACAAGCGCT ATCTGCCGTC
TTAATCCTTA TTGTCACCCT CGTCTTAGGT GGCACACTGC TTGAGGACTC ATCTCTTTTT
TTACGCTTAC TGTTCGGTTT AAGTCTTGGG TTCGCCTTAG CCAAGGGCTC GATTGGTTTT
GCCGGAAGTG TTAATCGTGC CTACAGGCGC GGCTCGACTC AACTCTTACA AACCTTAATG
CTGATGTTCG TGGTGACCGC TGTTATCAAT GCCGGGTTAT TGCTCAATTC TGATATCAAT
CATTACGATC TCTGGGTTAA TCCAATCAAT TTAGGCTTAC TCCTGGGGGG CGTGATGTTT
GGTGCAGGCA TGAGTCTGTC GAGCTGCTGC GCGACAGGCG TCATGGTCGA GTTGGTGAGT
GATGTTCCCC GTGCGTTAAC GACATTGCTC TTTTTTGGCG CCGGTGTTTT CATAGGCTTT
CCACTCCAGG CGACCCAGAG CTGGATCACC ACGACGGCAT TTTCTTCAGC CAGCTTCACC
GGTAAGGGCG TCTACCTCCC GGATCTATTT AGCTGGGGCC CATTAAACGG CTACTTTATG
GCTGTATTAA TGACGATGAT ACTCGCCGGC ATAGTGGTGT TTTGCGCCAA GAAGTATGAA
AACTACCGTC GCGCCAATGG ATCATTCTTA GGTGTCGATG GAGAGATCGC ACGTCAAAAA
ATGACAGCAA GAGGTACTGA GCAAGGCTTC ACCCTATTGA GTATCGACAG CTATCGACAG
TGGTTGGGTA ACCTATGGGA GATGAAGACC ACGGCGCTCG TTATCGCCTT AATCTTTGGT
GTGATGATGA TGTCCACAGG CGCTGGATGG GGCGCGTCGA CGCCATTCGG GATCTGGTTC
GCTAAAGGCT TAATGGCCTT TGGGGTCAGT GTAGATGACA TTGCCAACTT TACCCATCGC
CCAACGGCTA TGTTTACCAC CCCATTCTTC AGCCATGGGA TTTCAGTGCA AAATTTTGCC
ATCATGTTAG GCGCCTTGGT GGCCGTGCTC TTCATGGGAA AATTTGCCTT CTCATTTAAG
CTTAATCATT CACCGAAACA GTTCGCACTT TTCGCCTTAG GCGGCCTCCT GATGGGATTG
GGTACTCGCT TCGCCAATGG CTGTAATGTT GGCGCCCTAT TTACCCCTAT CGCTAACTTG
TCGCTATCTG GCTGGATTTA CCTGATCTTT TTGCTTGTCG GCGGCGTGAT CGGCAACCGA
TTTCATCAAG CGGTTGTAAA GTAG
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| Protein sequence | MVISNTGHGT ELSRQFAHHL TPVFLSVETW RLSQCHFSVI YFIYFKIVVL MNKKQALSAV
LILIVTLVLG GTLLEDSSLF LRLLFGLSLG FALAKGSIGF AGSVNRAYRR GSTQLLQTLM
LMFVVTAVIN AGLLLNSDIN HYDLWVNPIN LGLLLGGVMF GAGMSLSSCC ATGVMVELVS
DVPRALTTLL FFGAGVFIGF PLQATQSWIT TTAFSSASFT GKGVYLPDLF SWGPLNGYFM
AVLMTMILAG IVVFCAKKYE NYRRANGSFL GVDGEIARQK MTARGTEQGF TLLSIDSYRQ
WLGNLWEMKT TALVIALIFG VMMMSTGAGW GASTPFGIWF AKGLMAFGVS VDDIANFTHR
PTAMFTTPFF SHGISVQNFA IMLGALVAVL FMGKFAFSFK LNHSPKQFAL FALGGLLMGL
GTRFANGCNV GALFTPIANL SLSGWIYLIF LLVGGVIGNR FHQAVVK
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