| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3245 |
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| Symbol | |
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| ID | 5614033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3939309 |
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| End bp | 3939635 |
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| Gene Length | 327 bp |
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| Protein Length | 108 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640934183 |
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| Product | propeptide, PepSY amd peptidase M4 |
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| Protein accession | YP_001474977 |
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| Protein GI | 157376377 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3212] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000406601 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTTG GTTCCATGTT GGTACTCACA ACCTGTATTC TTATTCCGTT TTTCGGACAG
GCATCGAGTG CCCAACTACC AGGGATTGGC GCTGCTTCGA TGAGCATCGC CGCTCAGACA
TCGAAAAAAG CTCCCCAACA GCTCAAAGTC AGAAGTCGTG AACAGGCTAT TCAGTTAGTT
AAACGTCAAT ATCAGGGAAA AGTACTCAAG GCACAATCGA GCCGAGTCAA TGGTCATCCG
GGTTACAGAG TTAAGTTGAT ATCGAGCGAG GGAGTGGTGT TTTATGTCTC TGTCGATGCC
AAAACCGGCA GCGTGCGCAG AAATTAG
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| Protein sequence | MKFGSMLVLT TCILIPFFGQ ASSAQLPGIG AASMSIAAQT SKKAPQQLKV RSREQAIQLV
KRQYQGKVLK AQSSRVNGHP GYRVKLISSE GVVFYVSVDA KTGSVRRN
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