| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3241 |
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| Symbol | |
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| ID | 5613112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3934167 |
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| End bp | 3934601 |
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| Gene Length | 435 bp |
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| Protein Length | 144 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640934179 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474973 |
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| Protein GI | 157376373 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2128] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.371033 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTAAAC GTATCGATCT GGCTAAAACA CAACCTGCTG CACTTACCGC CATGCTTAGT
GTTGAAAATT ACCTTTCACA AACGGCACTT CCCGCTAAGT TGAAAGAGCT GATTAAGATA
CGTGCATCTA TGATTAACCA GTGCGCTTAC TGTATCGAGA TGCATACCGC CGAAGCACTA
AAAGCCGGGA TTGAACAGCA AAAGCTGTTC GCCATATCAG CCTGGAGAGA GTCCCCGTTA
TTCGATGACA AAGAGCGTGC GGTATTAGCA TTGACCGATG AGATGACCTT GATTGCCGAC
TCAGGGGTAT CCGATACAGC TTATCAGGCA ACTCTGGAGA AGTTAGGAGA GGAGCAGCTC
GCAGAGGCCA TGATGCAAAT AATTATGATC AACGCCTGGA ATCGTTTTGC CTTGGCAACA
CAGATGAAAC ACTGA
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| Protein sequence | MTKRIDLAKT QPAALTAMLS VENYLSQTAL PAKLKELIKI RASMINQCAY CIEMHTAEAL
KAGIEQQKLF AISAWRESPL FDDKERAVLA LTDEMTLIAD SGVSDTAYQA TLEKLGEEQL
AEAMMQIIMI NAWNRFALAT QMKH
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