| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3227 |
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| Symbol | |
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| ID | 5613763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3917515 |
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| End bp | 3918741 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640934165 |
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| Product | crotonobetainyl-CoA:carnitine CoA-transferase |
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| Protein accession | YP_001474959 |
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| Protein GI | 157376359 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAAGA AATTAACCAC TCCTACGTTC GGCCCGCTAT CCGGGGTTCG GGTTGTATTT
TCCGGTATTG AGATCGCAGG GCCATTTGCT GCCCAGATGC TTGCCGAGTG GGGCGCAGAA
GTCATTTGGA TTGAGAACGT GGCTTATGCA GATACCATAC GTGTACAGCC TAACTATCCT
GAGCTGTCTC GTCGTAACCT ACATGCCTTG TCTCTGAATA TCTTTAAAGA TGAAGGTCGT
GATGCTTTCC TTAAACTGAT GGAAACCACC GATATCTTCA TCGAAGCGAG TAAAGGTCCA
GCCTTCGCTC GTCGTGGCAT CACCGACGAA GTCTTGTGGG AGCGTAACAA GAAGCTGGTT
GTGGCTCACC TGTCAGGGTT CGGACAGTAC GGCACCGATG AGTACACCAA TCTTCCTGCT
TACAACACTA TTGCTCAGGC ATTCAGTGGT TACCTGATCC AGAACGGGGA TAAGGACCAG
CCAATGCCGG CCTTCCCTTA TACGGCAGAC TACTTCTCAG GCATGACAGC GACCACTTCA
GCCCTGGCGG CCCTATATCG TGTACGCGAA ACGGGTGTCG GCGAAAGTAT CGATATCGCT
ATGTATGAAG TGATGTTACG CATGGGTCAG TACTTCATGA TGGATCATTT CAATGGCGGC
GAGATGTGCC CGCGTATGAC CAAAGGTAAA GATCCATACT ACGCCGGTTG TGGTCTGTAC
ACCTGTGAGG ATGGCTATAT CGTTATGGAG CTGGTCGGTG CGATGCAGAT AGAGGAGATG
TTCAAGGATA TGAATATTTC TCATCTCTAT GGTACAGAGG AGATCCCTGA AGGAACTCAG
TTGATCCATC GCGTCGAATG TCCTTTCGGT GAGCAGGTTG AAGACTGCCT GGATGCTTAT
ATGGCGACTC GCACTATCGA AGAGGTGTTA GCAAGATTCG CCGAGCTGAA AGTGGCCTGC
GCTAAAGTGC TGACCGTTCC TGAGCTTGAG TCTAACCCAC AATATGTTGC TCGTGAGTCA
ATCACACAAT GGCAAAACAT CGATGGCAAG ACCTGCAAGG GGCCAAACGT GATGCCTAAG
TTCAAGAATA ATCCGGGTCA GATATGGCGT GGTATGCCGA AACACGGCAT GGATACCGCG
GATATCCTGA GTGACATTGG TTATTCACAA GAAGAGATCC AAAGTTTAAG TGAAAAAGGC
TTGGCCAAAG TCTCTGGTAG TAAGTGA
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| Protein sequence | MSKKLTTPTF GPLSGVRVVF SGIEIAGPFA AQMLAEWGAE VIWIENVAYA DTIRVQPNYP
ELSRRNLHAL SLNIFKDEGR DAFLKLMETT DIFIEASKGP AFARRGITDE VLWERNKKLV
VAHLSGFGQY GTDEYTNLPA YNTIAQAFSG YLIQNGDKDQ PMPAFPYTAD YFSGMTATTS
ALAALYRVRE TGVGESIDIA MYEVMLRMGQ YFMMDHFNGG EMCPRMTKGK DPYYAGCGLY
TCEDGYIVME LVGAMQIEEM FKDMNISHLY GTEEIPEGTQ LIHRVECPFG EQVEDCLDAY
MATRTIEEVL ARFAELKVAC AKVLTVPELE SNPQYVARES ITQWQNIDGK TCKGPNVMPK
FKNNPGQIWR GMPKHGMDTA DILSDIGYSQ EEIQSLSEKG LAKVSGSK
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