| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3222 |
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| Symbol | |
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| ID | 5613675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3911803 |
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| End bp | 3912753 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934160 |
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| Product | alpha/beta hydrolase domain-containing protein |
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| Protein accession | YP_001474954 |
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| Protein GI | 157376354 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0657] Esterase/lipase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.29245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTCG ATCCAAAAGT TGAACAGTTC TTGCAAGAGG TGCGTGACTC GGGAGCCCCG
GCTTATGAAG ATATGACGCC GGCACAGTCC CGACGTGAAG ATCTAACCGC ATTAGCCATA
GCAATACCAA GCCGTAAACC CGAGACGGTT GCGGCCGTAG AGCATAGATT TATTCCGGGG
CCGACGGCCG ATCTGCCTAT TCGTATCTAT CGCCCCGAAG GCGTTGAAGA TACAGCCGGT
TTACAGCCCG GGCTTATCTT TATTCATGGC AGCGGCTGGG TAGTATCTAA CATTGAAACC
AATGATTCAT TTAGCCGTGC CTTGGCCAAC CGTACCGGAA CCGTGGTCAT TGCGATTAAT
TACCAGAAGG CACCGGAGCA CAAGTTTCCT ATCCCTATGG ATGATTGTTA TGCCTCGACA
CAATGGGTGT TCGAGTACGC ATCTCAACTT GGTTTGGATG TGAACAGAAT TGGTATTTTA
GGCGACAGTG CCGGTGGTAA TCTTGCCGCC GCAGTGTGTT TGCGCCTGCG TGATGAAAAT
GGTCCTAAGC TGGCTTATCA GGTTTTAGTC TATCCGGCTG TACAATACGG GTGGCATACT
CCTTCGGCCG TCGCCAATGC CGAGGGTTAT CTATTGCAGC AAGCGAGTAT GAAATATTAC
TGGCATCACT ATATGCGCAG CGAGGCCGAT GCAAAAAATC CCTACTGCTC GCCCCTCGGT
GCTGCCGACC ATAGTGCGTT ACCACCGACT TTTATCTATA CCGCTCAGTA TGATCCCTTG
TGTGATGATG GCTGTCATTA TGCGCAAAAA CTTCAGGCAT GTGGCGTGCC GGTAAAACAT
AAGATGTACG AGGGGGTTAT TCACGGTTTC ATTAAGATGT TGGGTGTGTT CGATCAAGCC
GATGAGTTTC TCGATGAGGT CAGCGAAGAC TTGAGTGCAA TAATCGGTTA G
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| Protein sequence | MPLDPKVEQF LQEVRDSGAP AYEDMTPAQS RREDLTALAI AIPSRKPETV AAVEHRFIPG
PTADLPIRIY RPEGVEDTAG LQPGLIFIHG SGWVVSNIET NDSFSRALAN RTGTVVIAIN
YQKAPEHKFP IPMDDCYAST QWVFEYASQL GLDVNRIGIL GDSAGGNLAA AVCLRLRDEN
GPKLAYQVLV YPAVQYGWHT PSAVANAEGY LLQQASMKYY WHHYMRSEAD AKNPYCSPLG
AADHSALPPT FIYTAQYDPL CDDGCHYAQK LQACGVPVKH KMYEGVIHGF IKMLGVFDQA
DEFLDEVSED LSAIIG
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