| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3220 |
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| Symbol | |
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| ID | 5613673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3908002 |
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| End bp | 3910308 |
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| Gene Length | 2307 bp |
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| Protein Length | 768 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934158 |
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| Product | penicillin amidase |
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| Protein accession | YP_001474952 |
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| Protein GI | 157376352 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2366] Protein related to penicillin acylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAGAA TAATAAGAAT ATTCCTGCTC GGAGCCTTAA CACTCACCTT TCTCGCCGCA
ACGGGCATCT ACCTTGGGCT TCACCTGAGT TTACCTAAGT TGTCGGGTCA ATGGGAGAGC
GGGGGCATTG CGTCTGATGT TAAGATTGAA CGAGACCGAT TAGGTACTGC GATTGTGAGC
GGCGATAGTC GCCGTGATGT GGCATTTGCA TTAGGTTATG CCCATGGTCA GGACCGTTTT
TTTCAGATGG ACCTGCTTAG GCGAAACTCC GCGGGCGAGC TCTCGGAAAT ATTTGGTGAA
AAGGCGTTAA AGCTGGATGA ATCTCGCCGT TTTCATCAGT TCAGAAAACA TGCCGAAAAC
ATCGTTGCCA AGATGCCGGT AACCGAAAAG TTATTGTTGC AATCCTATGC TTATGGCGTC
AATGAAGCCT TAAAATCCAT GCCCGTGTAT TCATTTGAAT ACCTTCTCAC TGGGGCGACT
CCCTCTCCAT GGAAACCTGC CGATAGTTTA TTGGTCATCT ATAGTATGTA TCTGGACCTG
CAGGCTAATA CGGTTAAGCG TGACCTGGTG TTAGAGCAGA TTAAACGATT TTATGGTGAG
GAGATGTTGG CGTTTATTAC TCAGCCAAGC TCCTTTCAAG CGGCGCTCGA TGCCAGTATT
CTCCTCATGG AAGATGTCAG TATTCCGAAT CTCTCTCCCG AATTGATGGC GAGTGCAGTC
AATCAAACGA TTGAAGAACC CCTGGATATC GGCAGCAATA ACTGGGCGGT AACCGGGGCG
CTGACCGAGT CGGGACGCGC CATGTTATCC GATGACATGC ACCTCTCATT TGCTGTACCT
ATCATCTGGT ACCGTGCTCA GCTTAATTAC CCGAACCCGA TAACCAAAGA GAGTGTGCAG
GTCACTGGGG TCTCCCTGCC CGGCGCGCCG GTCATTGTGA TCGGTAGTAA TAATAAACTT
GCCTGGGGAT TTACTAACGC CTATATCGAC ACGGCCGACT GGATAACGCT AGCCGTCGAT
GAACCCACTG TATTTGAGAC AGAGCAGATC CCACTCCCCG ATGGCAAGCG CCATGAATAT
AATATCGAGA TGTCTCAATA TGGACCGGTT CGCACTGTTG GCGGACAGAG ATATGCGTTG
AGCTGGGTGG CCCATAAAGA CTATGCGGTC GATGTGGACT TGATGGGACT GGAGACGGCA
ACAGATGTGG CCGATGGTCT GGAGGTGGCG ACAACAGTTG GGATCCCGGT ACAAAACATG
ATGATCGTGG ACGGGCAGGG CAACGCCGCA TGGAAACCTA CCGGTGCGAT CCCATCACGT
ACTAATCCAT CAGATGTCGC TCAAGATGCC TCAGAGTTCC AAGCCAAGGG GTGGAACCTT
GACGAAACGT CGCTTCCCTG TGTGCTCAAC CCTGAAAATG ACCGTCTTTG GAGTGCCAAT
GCACGGGTGA TGTCATCGAG TGAACAAGCC AGATTTGGTG ATGGCGGGTA TGCGCTCGGT
GCGCGTGCGA TGCAAATTCG CAATAATTTA CAGGCAAATT CTCATTTCGA TGAAGCAGCA
TTTTATCGGC TTCAGTTGGA CAACCGTGCA GAGTTTTTAA AGCCTTGGCA CGGCTATCTG
CTTGAGCTGC TCTCGACCCA GCCCAAACGC TTTGCCAAAG ATATTCAGCA CCTTCGAGAC
TGGCAAGCGT GCGCCTGCTC AGGCTCGGTA GGCTACACCT TAGTCCGGCA TTTCAGGGCG
AAGCTAATCG ATGCCAGTTT TGCACCTATA GAGACTGGTT TATCGAAACA TAACTTATCT
CTTTCGGTAG TTAAACGTTA TCTGGAACCT GGAATGTGGC AGTTAATCGA GGAGAGACCT
GAAACCTGGT TAGCCGATGG TTATGAAAGT TGGGATGACT TTGCTATCGA TAGCTATCAA
CACTCTGTTG CCGAATTGTT GGCAGATCAT AGTGACGGTG AGGAGTTAGC CGACCTGAGC
TGGGGCAAGG TCAATGCCCT GAAGATCCAG CACCCCTTCA GTAAGCAGTT GCCAATTCTA
AGCTCCTGGT TAGATATGCC AGAAGTCGAG GCCTTCGGTG ACACCTTTAT GCCTGCCGTC
CAGCGCAGCT CTTTCGGTGC TTCACAGCGT TTCATCGTAC AGCCTGGAGC CGAGGAAAAT
GCCATCATGA CTATCCCCGG TGGTCAGTCA GGCCATCCCT TATCTGACTA TTACCGGGCA
GGGTTCGATG AATATGCTAA ACAAGAGTCT ACGCCTTTGC TACCGGGTGA GGTGCTGCAT
AGGATAGTCA TAACACCGGT TCAATAA
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| Protein sequence | MFRIIRIFLL GALTLTFLAA TGIYLGLHLS LPKLSGQWES GGIASDVKIE RDRLGTAIVS
GDSRRDVAFA LGYAHGQDRF FQMDLLRRNS AGELSEIFGE KALKLDESRR FHQFRKHAEN
IVAKMPVTEK LLLQSYAYGV NEALKSMPVY SFEYLLTGAT PSPWKPADSL LVIYSMYLDL
QANTVKRDLV LEQIKRFYGE EMLAFITQPS SFQAALDASI LLMEDVSIPN LSPELMASAV
NQTIEEPLDI GSNNWAVTGA LTESGRAMLS DDMHLSFAVP IIWYRAQLNY PNPITKESVQ
VTGVSLPGAP VIVIGSNNKL AWGFTNAYID TADWITLAVD EPTVFETEQI PLPDGKRHEY
NIEMSQYGPV RTVGGQRYAL SWVAHKDYAV DVDLMGLETA TDVADGLEVA TTVGIPVQNM
MIVDGQGNAA WKPTGAIPSR TNPSDVAQDA SEFQAKGWNL DETSLPCVLN PENDRLWSAN
ARVMSSSEQA RFGDGGYALG ARAMQIRNNL QANSHFDEAA FYRLQLDNRA EFLKPWHGYL
LELLSTQPKR FAKDIQHLRD WQACACSGSV GYTLVRHFRA KLIDASFAPI ETGLSKHNLS
LSVVKRYLEP GMWQLIEERP ETWLADGYES WDDFAIDSYQ HSVAELLADH SDGEELADLS
WGKVNALKIQ HPFSKQLPIL SSWLDMPEVE AFGDTFMPAV QRSSFGASQR FIVQPGAEEN
AIMTIPGGQS GHPLSDYYRA GFDEYAKQES TPLLPGEVLH RIVITPVQ
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