| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3210 |
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| Symbol | |
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| ID | 5613395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3889152 |
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| End bp | 3889961 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640934148 |
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| Product | regulatory protein RecX |
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| Protein accession | YP_001474942 |
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| Protein GI | 157376342 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2137] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.886971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGCC CACCACTACG TCAAGCCAAA ACTATCGATA ACGTTTTTAA TAGTGCCTAT
TGGCACCTTG GCCAGCAAGA TTTTACCATT AATGAAATTC GCACCAAGCT TGAGCGTAAA
ACCGAAAACC AAGAATGGAT TGATATCGTA CTCGCCAAAC TAATAGAGAA CGGTTATTTA
AAAAATAACT ATGACTTTGC TATACGCTAT TGCGAGTTGG CTTTTAGTAA TGAACTCGGT
ACTGGCGCGA TAAGACGTAA GTTACAACTG CGCGGCGTAC CCGTTACAGA GATTGATACC
GCTATAGAGC AAGTGATGGA TGAGCAAAAA GTCGATGCCT TTGAGATGGC CACATCCAGG
CTGCTAAGCA AATATGATAA CTTTTATGGC ACCAACAGAG AAAAAGTCTA TGCCCAGATG
GCCACAAAAG GGTTTTCCCG AGTAGAAATC GACCACGCAT TATCACAGCA TCCAGAACGT
GAAACATTGC GCAGTAAATT AGCCGTAAAA GCAGACAAAG CCGACTTAAC AACTGAAATA
ATCAAACTAT TTAATAAAGG CAAAGGCGAA ACCCTCATCC TGCAGGAATT AAAGCAGCGA
CTGATTGATG TGAGCGATTT CGAAGATACC TTGTATCAAT TAATGCTAAC AGGCGATATC
GATTTTTATC AAAGCTGTAA AAATGAGCTG GCTAAAAAGC GCTATGACTT ATCGGACTAT
AAAGAAAAGT CGAAAGCGTA TGCGTATTTA TCCCGTAAAG GGTTCGGCAG TGACGAAATA
AAAGAGGCAA TGAATCCGGA TGATGACTAA
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| Protein sequence | MQRPPLRQAK TIDNVFNSAY WHLGQQDFTI NEIRTKLERK TENQEWIDIV LAKLIENGYL
KNNYDFAIRY CELAFSNELG TGAIRRKLQL RGVPVTEIDT AIEQVMDEQK VDAFEMATSR
LLSKYDNFYG TNREKVYAQM ATKGFSRVEI DHALSQHPER ETLRSKLAVK ADKADLTTEI
IKLFNKGKGE TLILQELKQR LIDVSDFEDT LYQLMLTGDI DFYQSCKNEL AKKRYDLSDY
KEKSKAYAYL SRKGFGSDEI KEAMNPDDD
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