Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_3186 |
Symbol | |
ID | 5611886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 3844311 |
End bp | 3845249 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640934124 |
Product | 4'-phosphopantetheinyl transferase |
Protein accession | YP_001474918 |
Protein GI | 157376318 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2091] Phosphopantetheinyl transferase |
TIGRFAM ID | [TIGR00556] phosphopantethiene--protein transferase domain |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.214486 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCACCTA AATTATTACA ACCTTGTTCA TTGCCGACAG TTAAGCTCTA CTTTTGTCCT CTGGATTTTA CCTCGATGAA CTTTGCGCAA GCTCAAATCA TTCAATCTTG GCTGAGTGAA GATGAGTCGG TAAAGGTATC GCGTTATATT CAGCTCACTG CACGGGATAA AGGGTTAATG GTGCGCGGGT ATCTGCGTGG TATCTTGTCG ATCTGTTCAG GGTATAAACA TGATGAGCTT ATAGGTGACA AGGGGATCGC CCCCGGCGAT TGGCGCTTTC AATATGGAGA GAAGGGCAAA CCAAGCTTGG TTCCTGAGCA GAGGGAGATG ACGGGGCTGG AATTTAATAT CAGCCACAGC GGTAATTGGT TAGTCATCGC TGTAATCAAA CAGTCAAGTG GTCAATCAGG CTCTTTAGGG GCTGCGTCTA TGTCAGAGAA TATCGAGCTT GGTGTCGATA TCGAGCGCTA TCGGACAAGT ACCAATATCT ATCCGATATT GAATCATTAC TTTACTCAAG ATGAGTCTGA GTCGTTATTG GCGCTGGATG AAGACGCTCA ACGTGAGCGA TTCTTCGACC TCTGGGCGCT GAAAGAGTCT TATATAAAGG CTAAAGGCTT AGGTTTAGCC CTGTCGCTTA AATCATTTAG TTTTGGGTTT AGCCATGCAA CGGACCATGA GTTAGCCCTA TATGAAGATA ACACGCTTAT CGAAACATTA AGTGTGCTGA GTAACCTGGA GCTTAACTTC CATAAAGAGT CGTCTCTTAC AGAGTCGAAG CGAGATGCTG TTAGCAAATC TGCAAGTGAT GAGTGGTCAC TGTTTTTAGG ACGGTTAAAT TCAGAGTATC GTTTCGCCGT CAGTATTGGC TCTGCAGGTG ACTTGGGTTT AGAGGCGCAT AAAATGGATC TGAGTCGTTT GCTGACTCGA TATCAATAA
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Protein sequence | MAPKLLQPCS LPTVKLYFCP LDFTSMNFAQ AQIIQSWLSE DESVKVSRYI QLTARDKGLM VRGYLRGILS ICSGYKHDEL IGDKGIAPGD WRFQYGEKGK PSLVPEQREM TGLEFNISHS GNWLVIAVIK QSSGQSGSLG AASMSENIEL GVDIERYRTS TNIYPILNHY FTQDESESLL ALDEDAQRER FFDLWALKES YIKAKGLGLA LSLKSFSFGF SHATDHELAL YEDNTLIETL SVLSNLELNF HKESSLTESK RDAVSKSASD EWSLFLGRLN SEYRFAVSIG SAGDLGLEAH KMDLSRLLTR YQ
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