| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3172 |
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| Symbol | |
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| ID | 5610719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3829751 |
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| End bp | 3830140 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640934110 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474904 |
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| Protein GI | 157376304 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.87367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGACAG ACTTTTTACT CATTGTTGCA CTCGTTGTTA TTGCAGCATT TTTCTGGCAA
CTTCGACAGA TGGCTGAACT TAGCCGGGTA TTTGCTGAAC GTGAATGCCA GAAACAGAAG
GTACAACTGC TTGCTATTGC CATGGAGTCG GCAAGACCCA GCATAGGTGG CAGCAGCGGC
CTCACCTGGA AAGCAAAATA TATTCTCGAG TTCAGCACTG ACGGTATTAA TCAATTTCGG
GCTCACATTT GGATGCACGG AAAGAAAATC CAGAAAGTAC AATGGCCAAT ATTCCCTGAG
CCCGAATGGT TAGAAGCACC GGAAGCTCGC GGCTCGGTAG GGGGCAGTTG TGGCTCTCGC
GGTAGTTGTA ATTCAGGCAA GTGTAAATAA
|
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| Protein sequence | MMTDFLLIVA LVVIAAFFWQ LRQMAELSRV FAERECQKQK VQLLAIAMES ARPSIGGSSG
LTWKAKYILE FSTDGINQFR AHIWMHGKKI QKVQWPIFPE PEWLEAPEAR GSVGGSCGSR
GSCNSGKCK
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