| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3166 |
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| Symbol | purU |
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| ID | 5610909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3824143 |
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| End bp | 3824976 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640934104 |
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| Product | formyltetrahydrofolate deformylase |
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| Protein accession | YP_001474898 |
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| Protein GI | 157376298 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0788] Formyltetrahydrofolate hydrolase |
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| TIGRFAM ID | [TIGR00655] formyltetrahydrofolate deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACGTA AAGTATTGAT CACCGACTGT GCAGATGCAC AGGGATTAAT AACGAAAATC
ACTGGAGTAT GTTTTAAGCA TCACTTGAAT ATCATAAAAA ATAGTGAATT CGTTGATAAT
GCTCAAGGAC GCTTTTTTAT GCGAACTGAG CTAGAAGGAG ACTTCAATGA TGCACTCATT
TTATCCGATA TCGATGAAGT GTTACCTGAG TCAAGTCACG TCAAGTTGGT CAATACGGCT
AAGAAACGAG TGGTTATTTT AGTGACTAAA GAGGCTCACT GTCTTGGTGA TATTTTGATG
AAAGCCTATT ACGGTGGTTT GGATATTGAA ATTGCCGCGA TTGTCAGTAA TTACGATAGT
CTTAAACCGT TAACGGATAA GTTTGATATT CCTTTTCACT ATATTTCCCA TGAAGGCGTG
TCTCGCCTCG AGCATGAGAA GATGATGAGT AAAGTGATAG ATAAGTATCA GCCCGATTAC
CTTGTTTTAG CAAAGTTTAT GCGAATTTTA ACGCCTGAAT TTGTAGAGCA ATTCCCCAAT
CGAATTATCA ATATTCATCA CTCATTTTTA CCAGCATTTA TCGGTGCGGC CCCTTACCGA
CAGGCTTGGG AGCGGGGGGT GAAAATTATT GGTGCGACGG CCCATTTCGT TAACAATTGC
TTAGATGAAG GGCCAATAAT TAAACAAGAT GTCATTCCTG TCGACCACAG TTATAGCGCT
GAAGATTTGG CCCGGTGTGG GCGAGATGTT GAAAAAAGTG TACTAAGTAA GGCGTTACAA
TTGGTATTGC ATGAAGAAGT GATCGTGTAT GGGAATAAAA CTGTCGTTTT TTAA
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| Protein sequence | MERKVLITDC ADAQGLITKI TGVCFKHHLN IIKNSEFVDN AQGRFFMRTE LEGDFNDALI
LSDIDEVLPE SSHVKLVNTA KKRVVILVTK EAHCLGDILM KAYYGGLDIE IAAIVSNYDS
LKPLTDKFDI PFHYISHEGV SRLEHEKMMS KVIDKYQPDY LVLAKFMRIL TPEFVEQFPN
RIINIHHSFL PAFIGAAPYR QAWERGVKII GATAHFVNNC LDEGPIIKQD VIPVDHSYSA
EDLARCGRDV EKSVLSKALQ LVLHEEVIVY GNKTVVF
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