| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3156 |
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| Symbol | |
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| ID | 5610115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3813607 |
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| End bp | 3814464 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640934094 |
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| Product | phosphatidate cytidylyltransferase |
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| Protein accession | YP_001474888 |
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| Protein GI | 157376288 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0575] CDP-diglyceride synthetase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0354955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0297791 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTAAAAC AACGAATAAT AACAGCAATT TGGTTAATTC CCTTGGTTTT GGGGGCTATT
TTTTGGCTTC CTACGGAATA CTTCTCATGG GCTTTGATCC CTGTATTCCT TATTGCGGCC
AAGGAGTGGG GACAGATAAT TGATAAACGC TGTCAAATAA CGCAATGGAG CTTTACCGTC
ACCATAGGTG TACTACTGGT CGCGTTAAAT ATTTTTGTGC CTGCCGATGA ACTTTGGTTT
AAAGGGCACC TTCATCCCGT CTACCTGTCG GTTATCTTAA TCGGTGCAAT GTGGTGGGCA
ATCTCTTTTC TTTTAGTCCT CTCATTTCCG AAGAGCTCGG CCATGTGGCA AAAAAGCCAT
ATGTTCAAGT CGATGTTTGG ACAGTTGACT CTAATTCCAT GCTTTGCCGC ATTAATCGCC
TTAAAAGGCT TAAGCTCTGA AGCGGCTCCC TATTACGGTG GAACACTCGT CTTTTTGGTT
ATGATCGTGG TTTGGGCGAC CGATTCCGGG GCGTATTTTG CGGGGAAAGC ATTAGGTAAA
CACAAGTTGA TGCCCAATGT GAGTCCGGCT AAAACCATTG AAGGCTTACT GGGTGGTTTG
GCTACCAGCA TGATTGTTGT TTTCGGTATA ATGACAGCTT CTCCCGAACA AGAGCTTGGG
CTGGTGGTCG TTGTCACTCT ATTCGTAGCC CTTGTTTCCG CTGTCGGTGA CCTTTCCGAG
AGTATGTTCA AACGTGTAGC CGATATTAAA GATTCAGGTA CAATTTTACC CGGGCATGGG
GGGATACTCG ATCGTATCGA TAGTTTAACT GCCGCACTGC CTGTATTTAC CCTTATATAT
ATTGCATTTT GGATGTAA
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| Protein sequence | MLKQRIITAI WLIPLVLGAI FWLPTEYFSW ALIPVFLIAA KEWGQIIDKR CQITQWSFTV
TIGVLLVALN IFVPADELWF KGHLHPVYLS VILIGAMWWA ISFLLVLSFP KSSAMWQKSH
MFKSMFGQLT LIPCFAALIA LKGLSSEAAP YYGGTLVFLV MIVVWATDSG AYFAGKALGK
HKLMPNVSPA KTIEGLLGGL ATSMIVVFGI MTASPEQELG LVVVVTLFVA LVSAVGDLSE
SMFKRVADIK DSGTILPGHG GILDRIDSLT AALPVFTLIY IAFWM
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