| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3138 |
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| Symbol | |
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| ID | 5611293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3787888 |
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| End bp | 3788928 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934076 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474870 |
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| Protein GI | 157376270 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.363093 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAATTT CTAAAATTAA AAAAATTGCG ATAGCGGGTT CCATGTGTGT TTGCGCAAGC
TCTGCCTTGG CGGGATACGA CTTCGAAGTG GGTGAAGATG GCAAGATTAG CTTCGGTGGT
TACATCAAGG TTGATGCACG TTATGTCAGC GGTGATGTCG CCTATCGGGA TTTTTGGATA
GGTACGGGTA CACCGCTGTC TGAGGACGCG TCGCAGTTCA GAATCTTTGC CAATGAGTCG
CGATTCAATA CTAAATATGT TCATGGGGAT GTGACCGGCT TTATCGAGAT GGATTTTCTC
GGAGGCGGCG GTAACCAGGT GGTCTCGAAC TCAGCCAACC CCCGTATTCG CCACGCTTTC
ATCAAATACA AAGGGATCAC CGCAGGACAG ACCTGGACCA CCTTCATGAA TACCAGTGCC
ATTCCTGAGA GCGCCGACTT TGCCGGCGCA ACGGTAGGTT TGGCCTTCAT TCGTCAGGGG
CAGGTGCGTT TCGATGCAGG CAATTTCCAA GTCTCTATCG AAAACCCGGA GAGTGTCGGC
GGCGATACCG CCAACGATGA TCTGCCCGAT GTTGTCGCCC GTTATAACCT AAAAGGTGAT
TGGGGCAACG TGTCGTTATC GGCACTGGGC CGTAGCCTCA ATACGACAAT GGGTAATACA
GAAACGGCTT TAGGTGGATC GATAGCCGGA CGTATTAAGA CCTTTGGTAA AGATGATTTC
AGATTTCAGC TCCATCTGGG CGAAGTGGGC CGTTATGTCG GCGTAGGTAC CGCCTCAGAT
CTTATCGGAG AGGAGGTTGA AAGTACCACT TCTTACCTTG CCGCATACCG TCACTACTGG
ACAGATACTC TAAGAAGTAC CGTCTTGTAT GGCCGTGTTG AAACCGATAT CGCCGATGCA
GAGCGCACTC AATGGAGTGT CAACCTGTTC CAAAACCTGA CTCCCCAACT TGCCGTCGGA
TTCGAAGTCG GCAACTTTGA AATGGGCGAT AAGAATGTTG ACTCTGATTA TGCGCAGCTA
TCGATGAGAT ACGCACTCTA A
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| Protein sequence | MLISKIKKIA IAGSMCVCAS SALAGYDFEV GEDGKISFGG YIKVDARYVS GDVAYRDFWI
GTGTPLSEDA SQFRIFANES RFNTKYVHGD VTGFIEMDFL GGGGNQVVSN SANPRIRHAF
IKYKGITAGQ TWTTFMNTSA IPESADFAGA TVGLAFIRQG QVRFDAGNFQ VSIENPESVG
GDTANDDLPD VVARYNLKGD WGNVSLSALG RSLNTTMGNT ETALGGSIAG RIKTFGKDDF
RFQLHLGEVG RYVGVGTASD LIGEEVESTT SYLAAYRHYW TDTLRSTVLY GRVETDIADA
ERTQWSVNLF QNLTPQLAVG FEVGNFEMGD KNVDSDYAQL SMRYAL
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