| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3137 |
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| Symbol | |
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| ID | 5611292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3786894 |
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| End bp | 3787691 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934075 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001474869 |
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| Protein GI | 157376269 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.489025 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAGAAA CTATCCTGAA AGTAGACCAG ATATCTCTCG CATTTGGTGG TGTTAAGGCA
CTGACCGATG TGAGCTTCGA TGTAAACAAA GGCGAAGTGT TTTCCATCAT TGGCCCTAAC
GGGGCGGGAA AAACATCAAT GTTGAATTGT ATCTCCGGCC GTTATCGTCC CAATAAAGGG
GCCATTCATT TTGATAATAC CGATGTGACC AATTTAAGGC CCAATGACAG GGCCGACTTA
GGTATCGGCC GCACCTTCCA GAACCTCGCC CTCTTCGGCC ATATGTCGGT GTTGGACAAT
ATCATGGTTG GCCGACATCA CCTGATGAAG AATAACTGGT TAACCGGTCC CCTCTACTGG
GCATCTCCGG CTCAAAGAGA GGAGCTGACT CATCGCCGTC AGGTAGAGGA GATCATCGAC
TTCCTGGATA TCTCCCATGT GCGTAAGGCC GTGGCAGGCA CACTCTCATA TGGCCTTCGC
AAACGCGTCG AGCTGGCCCG CGCCATCGCC CTAAAGCCCA AACTTATTTT GCTCGATGAA
CCTATGGCCG GAATGAACCT GGAAGAGAAG GAGGATATGG CGCGCTACAT ACTCGATCTC
AATGAAGAGT TCGGTATCAC TGTGGTCATG ATTGAACATG ATATGGGCGT GGTGATGGAT
ATCTCTCATC AGGTCATGGT GTTGGATTTT GGTAAGAAAC TGATCTGCGG CCTCCCCGAT
GAGGTGATGG CTGATGAACA TGTGAGACAG GCTTACCTTG GATTAGAAGA GAACGAGCAG
TTACAGGAGG TGGGCTAA
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| Protein sequence | MTETILKVDQ ISLAFGGVKA LTDVSFDVNK GEVFSIIGPN GAGKTSMLNC ISGRYRPNKG
AIHFDNTDVT NLRPNDRADL GIGRTFQNLA LFGHMSVLDN IMVGRHHLMK NNWLTGPLYW
ASPAQREELT HRRQVEEIID FLDISHVRKA VAGTLSYGLR KRVELARAIA LKPKLILLDE
PMAGMNLEEK EDMARYILDL NEEFGITVVM IEHDMGVVMD ISHQVMVLDF GKKLICGLPD
EVMADEHVRQ AYLGLEENEQ LQEVG
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