| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3124 |
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| Symbol | |
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| ID | 5611250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3770634 |
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| End bp | 3772106 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640934062 |
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| Product | inosine 5'-monophosphate dehydrogenase |
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| Protein accession | YP_001474856 |
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| Protein GI | 157376256 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0516] IMP dehydrogenase/GMP reductase |
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| TIGRFAM ID | [TIGR01302] inosine-5'-monophosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.119862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACGTT TAAAGAAAGA TGCGCTTACC TTTGATGATG TGTTACTTGT TCCTGCACAT
TCGACTGTAC TCCCTAATAC TGCCATTCTC AAGACTCGTC TGACCACTAA GATAGAGCTT
AATACCCCAA TTGTCTCTGC GGCTATGGAT ACCGTAACCG AAGGACGCCT GGCGATCGCT
ATCGCACAGG AAGGGGGTTT AGGCTTTATT CATAAGAATA TGACGATTGA GCAGCAGGCC
GAAGAAGTTC GTAAAGTTAA AAGCTATGAA GCCGGTATCG TTCAAAAGCC TGTAACTGTT
ACGCCTACAA CGACACTCGC AGACCTTAAA GTGTTAACCC TGAAGAACGG TTTTGCCGGT
TACCCTGTTG TTAACGAAGC CAATGAACTT GTCGGTATCA TTACCGGTCG TGACGTTCGT
TTCGTGACTG ACTGGAGCCT TACCGTCGAT GAGGTGATGA CACCGAAAGA TCGTCTGGTT
ACTGTACCTG AAGGAACTAA GTTAGATGAA GTTCAGGCAC TGATGCATTC TCACCGTGTT
GAGAAGGTTC TCGTTGTCGA TGGTGATTTT AAGCTTAAGG GTTTGATTAC CGTTAAGGAT
TTCCAAAAAG CCGAGCGTAA ACCTAATGCA TGTAAAGATG AGTTAGGCCG CCTGCGTGTC
GGTGCTGCCG TTGGTGCCGG TGCGGGTAAC GAAGAGCGTG TAGATGCCTT AGTTCAAGCG
GGTGTTGATG TTCTGCTTAT CGATTCCTCT CATGGTCACT CTGAAGGTGT TTTACAGCGT
ATACGCGATA CTCGTGCTAA ATATCCTGAA CTACAGATTG TTGGCGGAAA CGTTGCGACT
GCAGAAGGTG CCTTAGCCCT AGTCGAAGCC GGTGTTAACG CTGTCAAGGT CGGAATTGGT
CCTGGTTCTA TCTGTACTAC CCGTATCGTT ACCGGTGTTG GTGTACCGCA AATTACTGCC
GTTTCTGACG CCGCAGCTGC AATTAAGCAC TTAGATATCC CTGTTATTGC CGATGGCGGA
ATTCGATTCT CTGGTGACTT GGCCAAGGCA TTAGCCGCTG GTGCATCTTG CATCATGGCA
GGTTCAATGT TCGCCGGTAC CGATGAGGCG CCGGGTGAAA CTGAGCTCCA TAATGGTCGT
GCCTATAAGT CATACCGCGG TATGGGTTCG TTAGGCGCAA TGAATCAGAG TCAAGGTTCA
TCAGACCGTT ACTTCCAGAG TGATAATGCG GCTGACAAGC TGGTACCCGA AGGTATCGAA
GGTCGCGTCG CTTACAAAGG TAAACTTAAA GAGATCATTC ATCAGCATAT GGGCGGTCTG
CGCTCTTGTA TGGGCCTCAC CGGCTGTGCA ACTATTAAAG ATATGAATGA AAAAGCAGAG
TTTGTAAAAA TTACCTCTGC GGGCATGGGT GAGTCGCATG TTCATGATGT GACCATCAGT
AAAGAAGCTC CGAACTACAG TCCTGGTTCA TAG
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| Protein sequence | MLRLKKDALT FDDVLLVPAH STVLPNTAIL KTRLTTKIEL NTPIVSAAMD TVTEGRLAIA
IAQEGGLGFI HKNMTIEQQA EEVRKVKSYE AGIVQKPVTV TPTTTLADLK VLTLKNGFAG
YPVVNEANEL VGIITGRDVR FVTDWSLTVD EVMTPKDRLV TVPEGTKLDE VQALMHSHRV
EKVLVVDGDF KLKGLITVKD FQKAERKPNA CKDELGRLRV GAAVGAGAGN EERVDALVQA
GVDVLLIDSS HGHSEGVLQR IRDTRAKYPE LQIVGGNVAT AEGALALVEA GVNAVKVGIG
PGSICTTRIV TGVGVPQITA VSDAAAAIKH LDIPVIADGG IRFSGDLAKA LAAGASCIMA
GSMFAGTDEA PGETELHNGR AYKSYRGMGS LGAMNQSQGS SDRYFQSDNA ADKLVPEGIE
GRVAYKGKLK EIIHQHMGGL RSCMGLTGCA TIKDMNEKAE FVKITSAGMG ESHVHDVTIS
KEAPNYSPGS
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