| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3119 |
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| Symbol | |
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| ID | 5611016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3761210 |
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| End bp | 3765091 |
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| Gene Length | 3882 bp |
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| Protein Length | 1293 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934057 |
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| Product | phosphoribosylformylglycinamidine synthase |
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| Protein accession | YP_001474851 |
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| Protein GI | 157376251 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
[COG0047] Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain |
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| TIGRFAM ID | [TIGR01735] phosphoribosylformylglycinamidine synthase, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGATCA TCCGCGGAGC CCCTGCTTTA TCAGCGTTTA GAGTTCAAAA ATTAATGGAA
GCTTGCGATC ATGCATCGCT TCCAGTTAGT GGAATTTATG CTGAGTATAT TCATTTAGTC
GATTTGTCTG AGTCATTAGA TGAAAGTGAG ACCCAGCAAC TCGAGAAACT CCTCACTTAT
GGTCCCGCAA TCGAAGCGCA CGCACCACAA GGTTCACTTC ATTTTGTTAC CCCACGCCCG
GGCACGATCT CACCTTGGTC ATCCAAGGCT ACCGATATTG CACACAACTG TGGCCTGGAC
AAGGTAAAGC GTTTAGAGCG TGGTGTTGCT TATTATGTCG AATCTGCAGC GCTTAACAGT
GAGCAACAAA AGACGTTAAA TTCACTCGTG CATGACCGTA TGGTCGAAGT GATTTTGAGC
AGTTTCGATA AGGCCCAGGT GCTGTTTGCC CGCACCGAGC CCGGTGAAGT AAAAAGCGTT
AATATCTTAG GCGAAGGTCG CCGTGCACTG GAGTTGGCGA ATACTGAACT CGGTCTCGCA
CTGGCGACCG ATGAGATTGA TTATCTGGTT GATAACTTTA ATCGTTTAGG CCGTAATCCC
AACGATGTCG AGTTGATGAT GTTTGCTCAG GCGAACTCAG AGCATTGTCG TCACAAAATT
TTCAATGCCG ATTGGACAAT CGATGGTGAG GTTCAACCAA AATCATTGTT CAAGATGATT
AAGAACACCT TCGAAACCAC GCCTGAAAAC GTATTGTCGG CTTATAAAGA TAACGCCGCG
GTAATGACAG GCTCAACAGC AGGTCGATTC TTCCCGAAAC AAGACGGTGT GTACGATTAC
CACAGCGAAC CTATGCATAT CTTGATGAAG GTGGAGACTC ACAACCATCC TACCGCTATC
AGCCCATATC CAGGTGCGGC AACAGGTTCG GGTGGCGAAA TTCGAGATGA AGGTGCAACC
GGCCGTGGTT CTAAGCCAAA AGCAGGTTTG ACCGGCTTTA GCGTTTCAAA CCTTAAGATC
CCGGGGTTTG TACAGCCTTG GGAAGCCGAT TACGGTAAAC CTGATCGTAT CGTTACTGCA
TTAGATATCA TGACTGAAGG CCCACTCGGC GGTGCGGCAT TTAATAACGA ATTTGGCCGT
CCGGCACTGG TGGGGTATTT CCGTACCTAC GAGCAGGAAG TCTGCAGCCA CAACGGTGTC
GAAGTGCGCG GTTATCACAA GCCAATTATG CTTGCCGGTG GTTTAGGTAA TATTCGCGAA
GAGCATGTGC AAAAAGGCGA GATCACTGTT GGTGCTAAGC TAATTGTACT GGGTGGTCCT
GCGATGAACA TCGGTCTGGG CGGCGGTGCT GCCTCTTCGA TGACATCGGG TGAGTCCAGT
GAAGACTTAG ATTTTGCTTC CGTTCAGCGT GAGAACCCTG AGATGGAGCG TCGCTGTCAG
GAAGTGATCG ACCGTTGTTG GCAGATGGGT GATGAAAACC CAATCCAGTT TATCCACGAT
GTCGGTGCGG GTGGACTATC TAATGCTTTC CCTGAACTCG TTAATGATGG TGAGCGTGGC
GGTAAGTTTG AGCTACGTAA AGTCCCTTCA GATGAGCCAG GCATGAGCCC ACTCGAGATC
TGGTGTAACG AATCACAGGA ACGTTATGTG ATGTCAGTTG CGCCTGAAAA CTTAGCAACA
TTTACCGCTA TCTGTGAACG TGAACGTGCG CCGTTTGCGG TTGTTGGTGT AGCAACTGAA
GAGAAAGAAC TGCTCCTTAG TGATGAGCAC TTTGAAAATC ATCCAATCGA TCTGCCTTTA
GAGGTCTTAT TAGGTAAAGC GCCTAAGATG AGCCGCGATG TTGTCAGCGC TAAGGCTAAT
TCGGCTGCGC TGGATCAGAG TGTGATTGAA GTGCAAGAAG CGGCGCATCG TATCTTGCGT
CTACCGACGG TTGCTGAGAA AACATTCCTT ATCACTATCG GTGACAGAAC GGTAACGGGT
CTGGTTAATC GCGATCAGAT GGTCGGCCCT TGGCAGGTGC CAGTCGCCGA TTGTGCGGTT
ACTGCGTCAA GCTATGATTC GTACGCTGGT GAAGCTATGT CCATCGGTGA GCGTACTCCG
CTTGCGCTAT TGGACTTTGG TGCCTCGGCA CGTATGGCCG TTGCCGAGTC GATTATGAAT
ATCGCAGGTA CCGACATCGG TTCGTTCAAG CGTATCAAGT TGTCTGCTAA CTGGATGTCA
CCTGCGGGTC ACCCAGGTGA AGATGCCGGC CTCTATGAAG CAGTAAAAGC CATCGGTGAA
GAGCTATGCC CAGAGTTGTC ATTGACGATT CCTGTGGGTA AAGACTCTAT GTCCATGAAG
ACGGCGTGGG AAGATAACGG TGAGCAAAAG ACCGTGACCT CTCCGATGTC TCTGGTTATC
ACCGCATTTG GTGTGGTCCA GGATATTCGT AACACTGTGA CTCCGGAGCT TCGCAGCGAT
AAAGGTGAGA CAGATCTGCT ACTCCTTGAT TTAGGCCTTG GCCAAAACCG TCTTGGTGGC
TCTTGTTTAG CACAGGTTTA CAGTGAACTG GGTGATATTG CGCCGGATCT TGATAATGCT
TCTACGCTGA AAGGTTTCTT CGAAGTCATC CAGCCATTGG TTGCTGACCA GTCAATTATC
GCTTATCACG ATAGAAGTGA CGGCGGCCTC TATACCACAT TGGTAGAGAT GGCATTTGCG
GGTCATACAG GACTGAATGT CGATATCAGC GCATTGAATG GTAACGATGT TGAGCGTCTG
TTTAACGAAG AGCTTGGCGG TGTTATCCAG GTAAGCCGTG AAAAAGTCGA CTCAATCGTT
GCGAAATTTG AAGCTGTTGG TGTGCCGTGT CATAAGGTCG CAGAGCTTAC ATCTGCGGAT
CTGATCACTA TTTGTGACGG TGAGCGTGAA GTATTAAGCG AGTCTCGCAC TTCTCTGCGT
ACTATCTGGG CTGAAACAAC CCATCGCATG CAGTCGTTGA GGGATAACCC TGAGTGTGCG
CTGGAAGAGT TTAAGCTTAA GCAGGACACG ACAGATCTGG GGCTAACCGT TGATTTAAGC
TTCGATCCGA GTGAAGACCT TGCTGCGCCA TATATCCTCA AAGGTGCTGC ACCTAAGATG
GCTATCTTGC GTGAGCAGGG CGTAAACTCA CATATTGAGA TGGCAGCGGC GTTTGACCGA
GCCGGTTTTG AATCTCGAGA CGTTCACATG AGTGACATCT TAAGCGGTCG TATTAGCCTG
AAAGAGTTCC AGGGGCTGGT GGCTTGTGGT GGTTTCTCTT ACGGTGACGT ATTGGGAGCG
GGTGAAGGTT GGGCTAAGTC TATTCTGTTC AACGAGCGTG CTCGTGAGCA GTTCAGTGGT
TTTTTCGAGC GCAGTGATAG CTTCTCTCTT GGTGTGTGTA ATGGCTGCCA GATGTTGTCT
AATCTAAAAG AGATCATTCC GGGTACAGAG CTTTGGCCAC ATTTCGTGCG TAACCGCTCG
GAGCGCTTCG AAGCTCGCTT TAGTCTGGTA GAAGTGCAGA AGAGTCCATC TTTGTTCTTT
GAAGGCATGG AAGGTTCACG TATGCCTATC GCCGTTTCAC ATGGCGAGGG GCGTGCCGAG
TTTGCATCAC CCCAGGCATT AGCTGCAGCA GAAGCGTCAG GCACAATTGC ATTGCGTTAT
GTTGATGGCA ACGGCCAGAT TGCGACACAG TATCCACAAA ATCCAAACGG CTCGCCTAAT
GCAATTACCG CATTAAGTTC AACCGATGGA CGAGTGACGA TTATGATGCC GCATCCTGAA
CGTGTATTCA GAACCGTGGC TAACTCATGG CATCCGGATG AGTGGGGCGA AGATAGCCCT
TGGATGAGAA TGTTCAGAAA CGTTCGTGTT AACGTAGGCT AA
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| Protein sequence | MEIIRGAPAL SAFRVQKLME ACDHASLPVS GIYAEYIHLV DLSESLDESE TQQLEKLLTY
GPAIEAHAPQ GSLHFVTPRP GTISPWSSKA TDIAHNCGLD KVKRLERGVA YYVESAALNS
EQQKTLNSLV HDRMVEVILS SFDKAQVLFA RTEPGEVKSV NILGEGRRAL ELANTELGLA
LATDEIDYLV DNFNRLGRNP NDVELMMFAQ ANSEHCRHKI FNADWTIDGE VQPKSLFKMI
KNTFETTPEN VLSAYKDNAA VMTGSTAGRF FPKQDGVYDY HSEPMHILMK VETHNHPTAI
SPYPGAATGS GGEIRDEGAT GRGSKPKAGL TGFSVSNLKI PGFVQPWEAD YGKPDRIVTA
LDIMTEGPLG GAAFNNEFGR PALVGYFRTY EQEVCSHNGV EVRGYHKPIM LAGGLGNIRE
EHVQKGEITV GAKLIVLGGP AMNIGLGGGA ASSMTSGESS EDLDFASVQR ENPEMERRCQ
EVIDRCWQMG DENPIQFIHD VGAGGLSNAF PELVNDGERG GKFELRKVPS DEPGMSPLEI
WCNESQERYV MSVAPENLAT FTAICERERA PFAVVGVATE EKELLLSDEH FENHPIDLPL
EVLLGKAPKM SRDVVSAKAN SAALDQSVIE VQEAAHRILR LPTVAEKTFL ITIGDRTVTG
LVNRDQMVGP WQVPVADCAV TASSYDSYAG EAMSIGERTP LALLDFGASA RMAVAESIMN
IAGTDIGSFK RIKLSANWMS PAGHPGEDAG LYEAVKAIGE ELCPELSLTI PVGKDSMSMK
TAWEDNGEQK TVTSPMSLVI TAFGVVQDIR NTVTPELRSD KGETDLLLLD LGLGQNRLGG
SCLAQVYSEL GDIAPDLDNA STLKGFFEVI QPLVADQSII AYHDRSDGGL YTTLVEMAFA
GHTGLNVDIS ALNGNDVERL FNEELGGVIQ VSREKVDSIV AKFEAVGVPC HKVAELTSAD
LITICDGERE VLSESRTSLR TIWAETTHRM QSLRDNPECA LEEFKLKQDT TDLGLTVDLS
FDPSEDLAAP YILKGAAPKM AILREQGVNS HIEMAAAFDR AGFESRDVHM SDILSGRISL
KEFQGLVACG GFSYGDVLGA GEGWAKSILF NERAREQFSG FFERSDSFSL GVCNGCQMLS
NLKEIIPGTE LWPHFVRNRS ERFEARFSLV EVQKSPSLFF EGMEGSRMPI AVSHGEGRAE
FASPQALAAA EASGTIALRY VDGNGQIATQ YPQNPNGSPN AITALSSTDG RVTIMMPHPE
RVFRTVANSW HPDEWGEDSP WMRMFRNVRV NVG
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