| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3100 |
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| Symbol | |
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| ID | 5613074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3738062 |
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| End bp | 3739135 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640934038 |
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| Product | N-acylneuraminate-9-phosphate synthase |
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| Protein accession | YP_001474832 |
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| Protein GI | 157376232 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2089] Sialic acid synthase |
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| TIGRFAM ID | [TIGR03569] N-acetylneuraminate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTAG TTATTGCCGA AGCCGGTGTT AATCACAATG GCAGTGAAGA GATTGCGATT
GCCCTGATCG ATGCAGCCTA TAAGGCTGGG GCCGACATCG TAAAGTTTCA AACTTTTAAA
GCAAAAAACT TAGTCACCGC AACCGCTGAG CAAGCCGATT ATCAGGTTAC AAATACAAAC
AAAGTCGAAT CTCAGCTTTC GATGTTGAGC CGTTTAGAGC TAAGCTATGA AGCCCATCGA
CGCCTGATAG ATCACTGTCA AAAACTTGGA ATCCAGTTTT TATCTACGGC ATTTGACTCT
GAAAGTTTGA GCTTTCTAGT AAACAAACTT CAGCTTAAAA CATTGAAAAT TGCATCGGGA
GAGATCACCA ATGCCCCCTT TGTTCTCGAG CATGCCCGTA CAGGCTGCGA TCTGATTTTA
TCCACGGGCA TGTCAACCTT AGCCGACATC GAATCTGCAC TGGGGGTTAT CGCATTCGGT
TTAACAGCGA CGCCCGATAC CAAGCCAGGT ATTGAGGCCT TTCAGACCGC CTATGCCTCG
GTCGAGGGAC AAGAAGCACT AAAAACTAAG CTGAAGTTAC TACATTGCAC CACCGAATAC
CCCGCACCAT TTAATGAGAT AAACCTCAAG GCGATGGACA CCTTAGCGTC GGCTTTCTGT
CTTGATGTCG GATATTCAGA TCACAGTCAA GGGATCACCA TTCCCATCGC CGCAACCGCT
CGCGGCGCGT GTGTCATTGA AAAGCATTTT ACCTTAGACA AAGAGATGCC GGGCCCCGAT
CATAAGGCTT CCATAGAACC AAAGGAGCTA ACGGAGATGG TGGCAGCTAT TCGCACCGTC
GAACTCGCTA TGGGAAGTGG TATTAAGACA CCACAACTTT CCGAATTAAA AAATCTTAAA
GTTGTCAGAA AAAGCTTAGT TACGACTCGA GCCATTCAAA AAGGCGAGAA TTTCTCGACC
AATAATCTCG CGGTAAAAAG GCCTGGCACA GGCACCAGTC CTTATCAATA TTGGCAACGA
CTCGACACTA AAGCGAGTAG AGATTACGCC GCCGGGGAGG TGATTTTTGA TTAA
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| Protein sequence | MTLVIAEAGV NHNGSEEIAI ALIDAAYKAG ADIVKFQTFK AKNLVTATAE QADYQVTNTN
KVESQLSMLS RLELSYEAHR RLIDHCQKLG IQFLSTAFDS ESLSFLVNKL QLKTLKIASG
EITNAPFVLE HARTGCDLIL STGMSTLADI ESALGVIAFG LTATPDTKPG IEAFQTAYAS
VEGQEALKTK LKLLHCTTEY PAPFNEINLK AMDTLASAFC LDVGYSDHSQ GITIPIAATA
RGACVIEKHF TLDKEMPGPD HKASIEPKEL TEMVAAIRTV ELAMGSGIKT PQLSELKNLK
VVRKSLVTTR AIQKGENFST NNLAVKRPGT GTSPYQYWQR LDTKASRDYA AGEVIFD
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