| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3096 |
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| Symbol | |
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| ID | 5610985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3732633 |
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| End bp | 3733799 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640934033 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474828 |
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| Protein GI | 157376228 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.726854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAA TTTCCTTGCT CCTTCTCACC TTAGTATCCC TGTACTCTCA GCTCGCATTC
GGCGCCTGGG TCGTAGTAAA AGGCGAAGCG AATATAGTCA ACGGTAATGT CCCCAAAGCT
CGGGAGGATG CAATTCATCA GGCTCTAACC TATGCCACTC TTAACAGTGG TGCCAACTTC
ACCAGCACTA AACAGGTCAA AAATGGTCAG CTTGTGGAAG ATAGCTTTTC AATTCAAAAC
CAATCGGAAG CGGCTAAAGT TGAGTTAGTC AATGAACTGA TAGAAGACGA TAAGCTCACC
GTCATGGTCA GAGTTGATAT CATTTCCTCC GGCACCAATG AGATGCAGTG TGACAGTCAA
TCTCTTAAGG CAGCCATATT AGTCCCGCAG TCACTCATTA AAGACAGAAC GCAGCTACGC
TACGGTAATA TCGGATTTTT TGAAAAGGCA CTATCTCAAC GAATTGGAGA CGCACTAACT
CAGAGTTCTC AAACCAGCTT TCCCCATATT CATGCCAACG AACGCTTAGA CATAGAGCAG
GCATTAGTCG ACATTCGGGG ATACCGTCTG CCCAGCTGGC TGAGTGAGAT AACAGACAGT
CAATATGTGT TACTGCCCGA AATCATCGAT ATTTCAACCG ATCCCGCAGA GAGTCATATG
CTTGGGTTGT GGAGCAGCGA CCCGAACCGC CAGTTTCAAA TTCGTCTTTC ACTCTATCAT
GGGATCAGTG GTGAGAAGAT CTGGAGTGAG AGCTACAATA CCTCCGCCCC CTGGGAGTTC
GACCGTCAGG AAACCGTTCC CTCTAATCAC CAAAGATTTT GGCAATCGAC CTACGGAAAA
ACCATCGACA AGGTGTTAGC TCAGGCCATC GAAGATATCG ATACCAGCTT AAGCTGTCGC
CCTATTCTGG GACAGGTCGT CGCCAAACAA CATGACAGGC TGATCATAAA CCTGGGACGA
CGCCACGGAA TACATGTAGG TGATTCATTC CAGCTTATCC TGCAACAAAA CTTCCCCGAC
CGATTCGATA AGATGAGAGC AGTTGCCGGA AAGAGCCGCG CGACGGTAGA AATTGATCAG
GTCACCGAAG ATACCGCCAC CGCCGTATTA GTCGGACAGA AAGCCTCCTT CAATGTACAA
ATAAATGATA TTGCGATAAA GATGTAA
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| Protein sequence | MKRISLLLLT LVSLYSQLAF GAWVVVKGEA NIVNGNVPKA REDAIHQALT YATLNSGANF
TSTKQVKNGQ LVEDSFSIQN QSEAAKVELV NELIEDDKLT VMVRVDIISS GTNEMQCDSQ
SLKAAILVPQ SLIKDRTQLR YGNIGFFEKA LSQRIGDALT QSSQTSFPHI HANERLDIEQ
ALVDIRGYRL PSWLSEITDS QYVLLPEIID ISTDPAESHM LGLWSSDPNR QFQIRLSLYH
GISGEKIWSE SYNTSAPWEF DRQETVPSNH QRFWQSTYGK TIDKVLAQAI EDIDTSLSCR
PILGQVVAKQ HDRLIINLGR RHGIHVGDSF QLILQQNFPD RFDKMRAVAG KSRATVEIDQ
VTEDTATAVL VGQKASFNVQ INDIAIKM
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