| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3090 |
|---|
| Symbol | flgA |
|---|
| ID | 5610898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sediminis HAW-EB3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009831 |
|---|
| Strand | + |
|---|
| Start bp | 3727170 |
|---|
| End bp | 3727949 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640934027 |
|---|
| Product | flagellar basal body P-ring biosynthesis protein FlgA |
|---|
| Protein accession | YP_001474822 |
|---|
| Protein GI | 157376222 |
|---|
| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1261] Flagellar basal body P-ring biosynthesis protein |
|---|
| TIGRFAM ID | [TIGR03170] flagella basal body P-ring formation protein FlgA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAGTA CAAAGTTCCG GTCACTAAGA AAGTATAGGT GTAATCTAGC TAATCAAGCT
AGTCTATTCA TTATGAAAGT AAAATATGTG GTCTATTTAA TCATTTTATT CCAATCAACA
CATGCTTTTA GCTCACAAGA AGCAAGTGTT CCTTCTCTAT CGACCATTTC GAACTTAGCT
ATAGCAGTTA TCGAAGAAAA AATTAACGTT GCAGAGCACG CAAAAGTCAA CATTACGCCC
CAAAGCTTGG ACTCCCGATT GAAGCCGCCT CTATGCCTGC CACCCGTTAA AGCAGAACTG
GCAAGCAACA GAGCTATCAA ACGAAATAAT ACGGTAAAGA TAAGCTGTAA CAGTCCACAA
CTTCAGTATC CCTGGCAAAT ATTTCTATCC GTTCGAGTCG ATGTGCTCTA TCCGGTAGTC
GTTTCCCGGG AGACCCTGGG ACCCGATGAT CTGATATCCA GTGGTGATGT CGCGATTCAA
TATGTAGAGC AAACGAGCTT AAGAGGGCAA CAGTTCGATA AAATTGAGGA TGTGGTTGGT
ACACGCGTCA AGAGGAGGAT CCCTCCCAAC CAACCCATCT TTATCAACAA CCTCTGTTTT
GTCTGCAAAG GTGATACGGT CTCGATTTTT GCCCGTTCAA AGAATTTCGA AATAAAAACA
GTGGGAGAAG CACTGCGTGA TGGCAATTTA GGTGATAGAA TTCGCATTAA GAACAGTTAT
TCCAACAAAA GCCTAGATGC TAAAGTCACA GGTGTTGGAG AGGTTGAAGT TAGGATGTAG
|
|---|
| Protein sequence | MRSTKFRSLR KYRCNLANQA SLFIMKVKYV VYLIILFQST HAFSSQEASV PSLSTISNLA
IAVIEEKINV AEHAKVNITP QSLDSRLKPP LCLPPVKAEL ASNRAIKRNN TVKISCNSPQ
LQYPWQIFLS VRVDVLYPVV VSRETLGPDD LISSGDVAIQ YVEQTSLRGQ QFDKIEDVVG
TRVKRRIPPN QPIFINNLCF VCKGDTVSIF ARSKNFEIKT VGEALRDGNL GDRIRIKNSY
SNKSLDAKVT GVGEVEVRM
|
|---|
| |