| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3085 |
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| Symbol | flgD |
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| ID | 5611475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3723198 |
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| End bp | 3724046 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934022 |
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| Product | flagellar basal body rod modification protein |
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| Protein accession | YP_001474817 |
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| Protein GI | 157376217 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1843] Flagellar hook capping protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCTCA TTAACCCACT TAGTAGTGCA GGTGCTCAAC CTATAGCTGG TCAGACGCAA
AACTCTGTGG CACCAGCGCA GCAGGCGACC CCTTCGGCCG CTCAAGCTGC AACGACGCAA
TCGACTGCGG ATTCCACGAC GGGAAACCCC TTTATCGATA GCATAAGGTT GCCAGAGGAA
TCATCGATTC CAGAGCCCAA TAGTCAAGAG TTAACTCAAG AAGATTTCTT CTCATTGTTG
AGCCAACAAC TTTCGATGCA GGATCCCTTT AAGCCTGTAG ACAATGACCA GATGATCTCG
CAAATGGCCT CATTCTCGAC TGTTGACGGT ATTAAGAACC TCAACGATGA GATTGTTAAC
CTGAACTCGG TGATGACCTC GAGTCAGGCA CTGCAAGCGT CGGGCTTAGT GGGGCAAAAA
GTGCTTATCC CGTCGGATAC AGGCTATATT TCAGCGGAAG ATCCTTCTAT TAACGGCATT
ATTAGTACTC CGGAAGCGAT CGATACAATT ACGGTGCGAG TCGAAGATGA TAAGGGCCAG
CTCGTTAAAT CCTTCACCAT CGATGGCAGC GCCGGGGGAA ATATCGATGT TAGTTGGGAT
GGATTGGGCG CGAATGGTGA GCCAGTGGCT TCGGGTAATT ACTCCATCAA GGCCAGTGGC
CGCATCGATG GCTCAAGTGA AGAACTTCCG GTTTCAACCT ATGCCCACGT AACGAGTGTC
TCCTTGGGCA CGGCGAGTAC CGGCTCGATT CTTAATCTGC GTGGTGTGGG CGGTATTAAG
CTTGGTGATG TGTTGGCCGT TGCTGAATCT GGCAGTGTCA ATAAACCCGT TGTTGATGCA
GAAACGTAA
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| Protein sequence | MSLINPLSSA GAQPIAGQTQ NSVAPAQQAT PSAAQAATTQ STADSTTGNP FIDSIRLPEE
SSIPEPNSQE LTQEDFFSLL SQQLSMQDPF KPVDNDQMIS QMASFSTVDG IKNLNDEIVN
LNSVMTSSQA LQASGLVGQK VLIPSDTGYI SAEDPSINGI ISTPEAIDTI TVRVEDDKGQ
LVKSFTIDGS AGGNIDVSWD GLGANGEPVA SGNYSIKASG RIDGSSEELP VSTYAHVTSV
SLGTASTGSI LNLRGVGGIK LGDVLAVAES GSVNKPVVDA ET
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