Gene Ssed_3082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_3082 
SymbolflgG 
ID5611472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3719899 
End bp3720687 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content49% 
IMG OID640934019 
Productflagellar basal body rod protein FlgG 
Protein accessionYP_001474814 
Protein GI157376214 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR01396] flagellar basal-body rod protein FlgB
[TIGR02488] flagellar basal-body rod protein FlgG, Gram-negative bacteria
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCCCG CGTTATGGAT AAGTAAGACT GGGTTAGACG CTCAGCAAAC AGATATCTCG 
GTGATTTCTA ACAATGTTGC TAACGCAAGC ACTGTTGGTT ACAAAAAGAG TCGAGCCGTC
TTCGAAGACC TTTTATATCA AACGGTTAAT CAGGCTGGAG GCGTGAGCGC TTCCAATACT
AAACTGCCAA ATGGTTTAAA TATCGGTGCG GGTACCAAAG TTGTCGCCAC GCAGAAGGTA
TTTACTCAGG GCAATATGCT TACCACGGAT AACTCGATGG ATCTTATGGT CGAAGGACCT
GGATTCTTCG AAATTCAGCT TCCCGATGGC ACCGCCGCTT ATACCCGAAA TGGTCAGTTT
ACCCTGGATG ATACCGGACA GATCGTAACA CCGGGTTCAG GTTATGTGGT TCAACCGGCG
ATCACCATTC CGGAAAATGC CACAGGTATT ACCGTGTCGG CCGAAGGTGA AGTGTCGGTT
AAAACGCCTG GCACTGCCGA GAGTCAGGTG GTTGGCCAGC TGAGCATGAC CGATTTTATT
AATCCAAGTG GTCTGGATCC CATGGGGCAA AACCTGTACA CGGAAACCGG AGCCAGCGGC
ACACCTATTC AGGGCACTGC ATCACTCGAT GGTATGGGGG CAATACGCCA GGGCGCGTTG
GAAACCTCAA ATGTAAATGT GACTGAAGAG TTAGTTAACC TGATTGAGAG TCAGCGTATC
TACGAGATGA ACTCAAAAGT GATATCGGCA GTCGACCAGA TGCTCTCTTA TGTGAACCAG
AATCTGTAG
 
Protein sequence
MHPALWISKT GLDAQQTDIS VISNNVANAS TVGYKKSRAV FEDLLYQTVN QAGGVSASNT 
KLPNGLNIGA GTKVVATQKV FTQGNMLTTD NSMDLMVEGP GFFEIQLPDG TAAYTRNGQF
TLDDTGQIVT PGSGYVVQPA ITIPENATGI TVSAEGEVSV KTPGTAESQV VGQLSMTDFI
NPSGLDPMGQ NLYTETGASG TPIQGTASLD GMGAIRQGAL ETSNVNVTEE LVNLIESQRI
YEMNSKVISA VDQMLSYVNQ NL