| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3071 |
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| Symbol | fliS |
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| ID | 5611938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3709001 |
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| End bp | 3709411 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640934008 |
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| Product | flagellar protein FliS |
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| Protein accession | YP_001474803 |
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| Protein GI | 157376203 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1516] Flagellin-specific chaperone FliS |
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| TIGRFAM ID | [TIGR00208] flagellar biosynthetic protein FliS |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGAAAGT CACTGCAATC ATATCGAAAA GTGTCAGTTG AGAGTGAAAT CTCCGTTGCG
TCCCCCCACC GAATCATTCA GATGATGTTT GAAGGTGCAC TGCAGCGTTT AGCACAGAGC
CGATATGCGA TTGAGAATAA TGATACCGCC AACAAAGGGA TCTATATTGG TAAGGCGATA
GGCATTATCA CCGGACTAAA TAACAGTTTA AATATGGAAG AAGGTGGAGA TATTCCCACT
AATTTAAGTG CACTTTATGA CTTTATGCTA CGTCGAATTT CTGATGCGAA TCTGAATAAT
GATGTTCAAG CGATCGATGA TGTTTCTGAT ATTCTGAGAA CGATTAAAGA GGGGTGGGAC
GCGATTCCGC CGGAACAGCA CCATATGGCA TCACACACCG AAGCCGTATA A
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| Protein sequence | MRKSLQSYRK VSVESEISVA SPHRIIQMMF EGALQRLAQS RYAIENNDTA NKGIYIGKAI
GIITGLNNSL NMEEGGDIPT NLSALYDFML RRISDANLNN DVQAIDDVSD ILRTIKEGWD
AIPPEQHHMA SHTEAV
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