| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3064 |
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| Symbol | |
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| ID | 5612012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3700030 |
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| End bp | 3701034 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640934001 |
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| Product | flagellar assembly protein FliH |
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| Protein accession | YP_001474796 |
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| Protein GI | 157376196 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCAA ATAGCCCCGA TAAGCCCAAA GATGAGAATA AACCAGAGTC TGAAATGGAC
TTCAGTCATT GGCAAATTCC CGATGTGACC CAAGCCGTCC CTGATGATGT ATCAAATCTG
TTCGGACGCA AGGCTGTTCA CCATGAACAC GTCGAAGAAA CTGACGCCTT TTCTCCTCCC
ACGCTCAGTG AAATTGAAGA TATCCGAAAA CAAGCAGAGC AGGATGGGTT CACAGAAGGT
AAAGATGAAG GCTACCAAGC GGGCATAGAA AGTGGTCGTT TGGAAGGGAT GAAACAGGGA
CATAGTGAAG GGTTTGAGCA AGGCCGGGAG CAAGGCTATC AGGATGGCGT CGAACAAGCT
AAAGTGTTAA TCAATCGGTT TGAATCCTTA CTGTCTCAAT TTGAAAAACC GATGCAGCTG
CTTGACAACG AAATAGAACA TGAGCTCGTT CAATTGACGA TGAAGCTGTC GAAAGCCGTG
GTTGGACACG AACTAAAAAC CCACCCTGAA CATATTCTTT CGGCATTAAG GTTGGGGGTC
GACTCTTTAC CGATAAAGGA GCAAGGCATT AATATTCGTC TGCACCCTGA TGATTATCAG
CTCGTTCAAG ACTTGTATAG CGTTAACCAG TTAGAGAAAA ATCGTTGGGA GCTGGAAGCC
GATCCTAGTT TGAGCCCAGG CGACTGTGTC ATTAATAGCC AGCGAAGTAG CGTAGATATG
CGTCTTGATA CTCGGATTAA TTCGGTTCTT GATGAGTTAG AGGGTCACCA GCAACATCTG
GCTCAAACTA TTGAACGGCA AAAACAGGAG TTAGACTCTG TGGCTAAGTC TGTTGTTCCC
TCTTCGGCAG CGCTGCCAGA CAATAATTCA AATAACTCAG AGCAACAAAT ACAGCCAGAT
AGCAACCCGC AGCAGGTCAG CATGGATAAG CAAGGTAACA CTGATGCGGT GTCAGGTGAG
GATTCCAGAG ATGAGCCTCC TTCCGGAGAC TCGAATGAGC AATAA
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| Protein sequence | MKPNSPDKPK DENKPESEMD FSHWQIPDVT QAVPDDVSNL FGRKAVHHEH VEETDAFSPP
TLSEIEDIRK QAEQDGFTEG KDEGYQAGIE SGRLEGMKQG HSEGFEQGRE QGYQDGVEQA
KVLINRFESL LSQFEKPMQL LDNEIEHELV QLTMKLSKAV VGHELKTHPE HILSALRLGV
DSLPIKEQGI NIRLHPDDYQ LVQDLYSVNQ LEKNRWELEA DPSLSPGDCV INSQRSSVDM
RLDTRINSVL DELEGHQQHL AQTIERQKQE LDSVAKSVVP SSAALPDNNS NNSEQQIQPD
SNPQQVSMDK QGNTDAVSGE DSRDEPPSGD SNEQ
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