Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_3059 |
Symbol | fliM |
ID | 5612258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 3694360 |
End bp | 3695385 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640933996 |
Product | flagellar motor switch protein FliM |
Protein accession | YP_001474791 |
Protein GI | 157376191 |
COG category | [N] Cell motility |
COG ID | [COG1868] Flagellar motor switch protein |
TIGRFAM ID | [TIGR01397] flagellar motor switch protein FliM |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0661453 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.103892 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTGATC TATTAAGCCA AGACGAAATT GATGCGTTAC TGCATGGTGT AGATGACGTA GAAGAAGATG AGGTAGACGA GGGGCTTGAT GCCCGCTCCT ATGACTTCTC TTCGCAAGAT CGTATTGTCC GTGGACGTAT GCCTACGCTG GAGATCGTGA ATGAGCGTTT TGCTCGCCAT TTACGGATCA GCATGTTCAA CATGATGCGC CGAGCCGCCG AAGTGTCCAT TAACGGTGTC CAAATGCTTA AGTTTGGCGA ATATGTCCAT ACTCTATTTG TTCCTACCAG TCTCAATATG GTGCGTTTTA GCCCCCTGAA AGGGACGGCA CTGATCACCA TGGAAGCAAG ATTAGTCTTT ATCTTAGTGG ATAACTTTTT TGGTGGAGAT GGACGCTTTC ACGCTAAAAT TGAAGGTCGT GAATTCACCC CAACTGAACG ACGTATCGTG CAGTTACTGC TAAAGATTAT CTTCGAAGAT TATAAAGATG CCTGGGCACC TGTGATGGAT GTCGAGTTCG ATTATCTGGA CTCTGAGGTC AACCCGGCTA TGGCTAATAT TGTTAGCCCT ACCGAAGTGG TTGTCGTCAG TTCATTCCAT ATCGAAGTCG ATGGCGGGGG AGGGGATTTT CATATCACCA TGCCTTATTC AATGATTGAA CCTATCCGTG AACTGCTTGA TGCCGGTGTA CAAAGTGACA CTCAAGATAC CGATATGCGT TGGTCGCAGG CATTAAAGGA TGAGATTATG GATGTAGATG TAGGCATAGA TGCAACCATT GTAGAGCATC AGGTTACGTT AAAAGATGTG ATGGAATTTA AACAAGGGGA CGTGATCACC GTTGAATTGC CGGAACATAT CGTTATGAGG GTCGAAGATC TGCCGACTTA CCGATGCAAA CTAGGTACTG CGCGTGATAA TTTAGCTTTG AGAATATGTG AAACCATTCC GAGACCGGAA ACGGCTAAGA ATGAGCTGCA ACTGGTCACT CGCAAGGCGA AGGTCAGAGA AGCGAAAGAG TTATAA
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Protein sequence | MSDLLSQDEI DALLHGVDDV EEDEVDEGLD ARSYDFSSQD RIVRGRMPTL EIVNERFARH LRISMFNMMR RAAEVSINGV QMLKFGEYVH TLFVPTSLNM VRFSPLKGTA LITMEARLVF ILVDNFFGGD GRFHAKIEGR EFTPTERRIV QLLLKIIFED YKDAWAPVMD VEFDYLDSEV NPAMANIVSP TEVVVVSSFH IEVDGGGGDF HITMPYSMIE PIRELLDAGV QSDTQDTDMR WSQALKDEIM DVDVGIDATI VEHQVTLKDV MEFKQGDVIT VELPEHIVMR VEDLPTYRCK LGTARDNLAL RICETIPRPE TAKNELQLVT RKAKVREAKE L
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