| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3048 |
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| Symbol | |
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| ID | 5612526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3684583 |
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| End bp | 3684966 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640933985 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_001474780 |
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| Protein GI | 157376180 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0702091 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGACAAGA ATATGAAGAT TCTCGTTGTT GACGATTTCT CAACAATGAG GCGTATCATC
AAGAACTTGT TAAGAGACTT GGGTTTTAAT AACACTCAAG AAGCAGATGA CGGTTCAACA
GCACTGCCTA TGTTGCAAAA AGGCGACTTC GATTTTGTCG TGACCGATTG GAATATGCCT
GGCATGCAGG GAATCGATCT ATTAAAAGCG ATTCGTGCAG ACGATGAGTT AAAGCACCTC
CCTGTGCTGA TGGTTACTGC AGAAGCAAAA AGAGAGCAGA TCATCGCAGC AGCGCAAGCG
GGTGTGAATG GTTATGTTGT TAAGCCTTTT ACAGCCGCTA CGTTAAAAGA GAAGTTAGAC
AAAATTTTTG AACGACTCGG ATAA
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| Protein sequence | MDKNMKILVV DDFSTMRRII KNLLRDLGFN NTQEADDGST ALPMLQKGDF DFVVTDWNMP
GMQGIDLLKA IRADDELKHL PVLMVTAEAK REQIIAAAQA GVNGYVVKPF TAATLKEKLD
KIFERLG
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