| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3047 |
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| Symbol | |
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| ID | 5612844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3683832 |
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| End bp | 3684569 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640933984 |
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| Product | chemotaxis phosphatase, CheZ |
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| Protein accession | YP_001474779 |
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| Protein GI | 157376179 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG3143] Chemotaxis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0783794 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGGCTA TAACTTCAGG GCTCATTTCG TTAGAGCAAG CAAATAAACT TGTCGAACTG
CTGACCGAAG GCCAGCAAGA GCAAGCCGAC GAGTTGGTCA GGGACATTGC AACGCCAATT
CAAAAAGAAC TGTTCGATGA GGTTGGAAGA CTGACTCGAC AGCTTCACAG TGCCATTGTT
GATTTTCAGG TCGATGACAG ACTGATCACA TTAGCGAGTA CTGAGATCCC TGACGCTAAA
GAACGCCTAA CATATGTCAT CGATATGACA GAGCAAGCTG CAAATAAAAC CATGGATGCT
GTTGAGGAGT GTCTGCCTTT GGCAGAGGCT CTGACAACGA ATATTCAATC GGTAAAACCA
ACATGGGGTA AGCTCATGAG GCGTGATATC GAACTGAATG AATTTAAGGT TCTTTGTCAT
GACGTTCAGC AGTTTGTCGA TCGAAGCGAA TTAGATTCGA TTCGTTTAAG AGAGCTACTA
AATGAAATTT TATTGGCTCA AGATTTCCAA GATTTAACAG GGCAGATGAT TCGAAGGGTC
ATCGACTTAG TACGTGAAGT CGAAAATAAC TTAGTTTCTA TGCTTACTGT ATTTGGTGAA
CAGCCCGTTA GTGAGGACAC ACCAATCACG AGCAGCAATG TTGAAGCCGA GGGGCCTATC
ATGAATGCAG AGGAACGTGA TGATGTTGTC ACAGGTCAAG ACGAAGTCGA TGATCTGCTT
TCGAGTCTGG GTTTCTAA
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| Protein sequence | MQAITSGLIS LEQANKLVEL LTEGQQEQAD ELVRDIATPI QKELFDEVGR LTRQLHSAIV
DFQVDDRLIT LASTEIPDAK ERLTYVIDMT EQAANKTMDA VEECLPLAEA LTTNIQSVKP
TWGKLMRRDI ELNEFKVLCH DVQQFVDRSE LDSIRLRELL NEILLAQDFQ DLTGQMIRRV
IDLVREVENN LVSMLTVFGE QPVSEDTPIT SSNVEAEGPI MNAEERDDVV TGQDEVDDLL
SSLGF
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