| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3046 |
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| Symbol | |
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| ID | 5612843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3681615 |
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| End bp | 3683816 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640933983 |
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| Product | CheA signal transduction histidine kinase |
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| Protein accession | YP_001474778 |
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| Protein GI | 157376178 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0699777 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTTG ATGTTGATGA AGAGATACTG CAGGACTTTT TGATCGAAGC TGGTGAAATT
TTAGAGCTTT TGTCTGAACA GTTAGTCACT CTGGAAAATA ATCCAGAAGA TACGGAACTG
CTAAACGCAA TCTTTCGAGG TTTCCATACC GTAAAAGGCG GTGCTGGATT TCTTAGCTTA
GGCCCAATGG TCGATGTGTG TCATGAAGCC GAGAATACCT TCGATCTGTT GCGGACAGGT
AAGCGAGAAG TATCTTCAGA ATTGATGGAT ATCATTCTGC AAGCAGTGGA TGCCATCAAC
GCAATGTTTG CTCAGACTCA GGCAGGTGTC GAGCAAGACC CCGCCGATGC AGAACTATTA
GCCAACTTAA AATTACTGAG CTCAGGTGCT CCTCTTCCCA GTGAAGGTGC TGCCCAGGAG
GCTCCAGCCT CCGACGACTC AATTGAGTTA TTCGATCAAG CTCCGGCAGC GGATGATTCG
GGTATCGAGC TGTTTGATGA GGCACCTGCA CCAGCAGTCC AAGCCCCGGA AACCACAGTC
GCTGGAGCTG GTAGCGGCTC TGGCAACGGC AGTATTGATG AAATTGATGA GTCAGAATTT
GAGGCGCTTC TCGATGCTCT TCACGGTGCG GCGAATGGTC CTACCGGTTC TAAGGATTCT
AAATCTGATG CTCCTGAAAC TCCTGCAAGC AGTGATATCA CAGACGATGA GTTTGAGTCA
CTGCTCGATG AACTGCATGG CTCTGGTCAG TTTAAAAATA AGGATGCACA AGTTGCCCCA
CCAGTTGAGC CTGCGCCTCC AGCGGTAGAT TCCGACGACA TATCTGATGA TGAATTTGAA
AAATTACTCG ATGAATTGCA TGGTTCGGGT GGAGCCCCCA AAGCTGTCAG CCCAGCTCCT
GTAGCTAGCC AGCCTAAGAG TTCACCTGCA GCTCCAGCAA CCCCAGTTGC CAAGCCTGCT
GCGAAAGCGC CGGTAGCTAA AGCGGCACCT AAGGCTGTAG CCAAAGCGGC ACCGGCGAAT
ATGCCACAAG CGGAAACGAC AGTTCGTGTC GATACTGCAA GGCTCGATCA GATCATGAAT
ATGGTCGGTG AGTTAGTGTT AGTGAGAAAC CGCCTTATCA GCTTAGGGAT TAACCGGGAC
GATGAGGAAC TCTCTAAGGC CTTGGCTAAT CTGGATCTTG TTACCGCCGA TCTTCAAGGT
GCGGTGATGA AGACTCGCAT GCAGCCGATT AAGAAGGTCT TTGGCCGTTT CCCTCGAGTC
GTGCGTGATT TAGCCCGTAC CCTGAATAAA GAAATTGATC TGAGAATGAT CGGTGAAGAT
ACCGATTTAG ATAAGAATCT TGTCGAAGCA CTTGCCGATC CATTGGTTCA CTTGGTTAGA
AACTCTGTCG ACCACGGCAT CGAGATGCCA GCAGACAGAG AAGCTACGGG TAAATCCAGA
ACGGGTACCA TAACCCTTTC TGCTAGTCAG GAAGGTGATC ACATCCTATT GAAGATTGAG
GATGACGGCG CCGGAATGGA TCCAAATAAA CTTAAAGAGA TCGCCATAAG TCGTGGTGTG
CTCGATGAAG ATGCCGCGTC AAGAATGTCT GACGAAGAGG CGTATAACCT GATTTTTGCT
CCAGGTTTCT CAACCAAAGT TGAGATCTCC GATATTTCGG GGCGTGGCGT CGGAATGGAT
GTGGTTAAAA CCCGTATTGC TCAATTGAAC GGAACCATTC ATATCGACTC CTTGCAAGGT
AAGGGAACTC GATTAGAGAT TAAAGTACCG TTAACGCTCG CGATTATGCC GACATTAATG
GTTGAAGTTG CAACACAAGT CTTCGCACTG CCTCTATCAA GTGTGAGTGA AATATTCCAC
CTCGATCTGA CTAAGACAAA TATCGTCGAT GGTCAGCTGA CAGTAATCGT TCGGGAAAAG
GCCGTGCCTC TGTTCTATCT AGAGCACTGG CTTAGCCGAA AACAGACCGG GTTTAAGCAT
GGTGATAAAG AGCATGGCCA TGTGGTTATT GTTCAACTTG GCACTATGCA GATAGGTTTT
GTGGTTGATT CTCTTATTGG TCAAGAAGAA GTTGTTATTA AGCCTCTGGG CACCTTGTTG
CATGGAACAC CAGGCATGGC AGGGGCCACA ATTACATCTG ACGGTGGTAT TGCACTGATC
CTTGATGTAC CTGGTTTGCT GAAGAATTAC GCAAAAAAAT AA
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| Protein sequence | MSFDVDEEIL QDFLIEAGEI LELLSEQLVT LENNPEDTEL LNAIFRGFHT VKGGAGFLSL
GPMVDVCHEA ENTFDLLRTG KREVSSELMD IILQAVDAIN AMFAQTQAGV EQDPADAELL
ANLKLLSSGA PLPSEGAAQE APASDDSIEL FDQAPAADDS GIELFDEAPA PAVQAPETTV
AGAGSGSGNG SIDEIDESEF EALLDALHGA ANGPTGSKDS KSDAPETPAS SDITDDEFES
LLDELHGSGQ FKNKDAQVAP PVEPAPPAVD SDDISDDEFE KLLDELHGSG GAPKAVSPAP
VASQPKSSPA APATPVAKPA AKAPVAKAAP KAVAKAAPAN MPQAETTVRV DTARLDQIMN
MVGELVLVRN RLISLGINRD DEELSKALAN LDLVTADLQG AVMKTRMQPI KKVFGRFPRV
VRDLARTLNK EIDLRMIGED TDLDKNLVEA LADPLVHLVR NSVDHGIEMP ADREATGKSR
TGTITLSASQ EGDHILLKIE DDGAGMDPNK LKEIAISRGV LDEDAASRMS DEEAYNLIFA
PGFSTKVEIS DISGRGVGMD VVKTRIAQLN GTIHIDSLQG KGTRLEIKVP LTLAIMPTLM
VEVATQVFAL PLSSVSEIFH LDLTKTNIVD GQLTVIVREK AVPLFYLEHW LSRKQTGFKH
GDKEHGHVVI VQLGTMQIGF VVDSLIGQEE VVIKPLGTLL HGTPGMAGAT ITSDGGIALI
LDVPGLLKNY AKK
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