| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3042 |
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| Symbol | |
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| ID | 5612595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3677883 |
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| End bp | 3679016 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640933979 |
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| Product | CheW protein |
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| Protein accession | YP_001474774 |
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| Protein GI | 157376174 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0835] Chemotaxis signal transduction protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0303282 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACCT CAGTTGATGA AACCGTATTC GATTATTTTT CTCTGCTTCT TACTGAGGTC
GAAGATGAGT CAAATATTCA AGTTGAGGCA CTAACGGCCG ATATTGCTGA ACAAGTGTTC
CCCGAACTGA TTTCAGACGG ATCAAGTGTC GAGGCGTTGA AACCAGAAGC TTTAAATCAA
GAACAAGTAA AACCAGATCT TGTAAATAAA AAGGCTGTAA ATATTGACCC TTTAACGCAA
GAGTCATCAA GGCCTGCTGG AAATGAGTCT GTAACTGAAA AGCCAGAAGC GATTGAGCCG
CCAAGGCTAC AAACACAACT CAAGACTCAA TCCCACAATC AGACGCATAC AGAGACACAG
GCGTTAACGA AACCAAAAAT TAGAGAGACC GATCCTAATC TGGATAAGTT GGCTCTGGAG
CAACTTTTAG CGCCGGTTTT CAAACCTGAG CCACAGATTG AAACTGAATC AATTGTTAAG
CTTCAGAATC AAACGCTTGC GAAATCGAAA ATTAAGACGA CATCTGTTCC GGATAAAGTC
TCTGTTAAGC CTAAAGTCGA TGTTCATGTT GAGAACAAGG CCGATATTAA GCAAAAGCAA
AAGCAGGAAC AGGAATTAGA GTTAAAGACA CAATTAGGTG AAATACCACC TAAAGTGACA
AAAGATCTGC TTGAAACGCT CGATGATGAG TTTCAGGTAC TATTCTTTAA GGTAGCAGGG
CTGACATTGG CCGTGCCGTT AGTGAGCCTG GGCGGAATAG TTAAAATTGA ACGGATTAAT
CATATTATGG GCAGACCCGC TTGGTATAAG GGAGTCCAAA CATATAGAGA TACACAGTTA
AATGTTGTCG ATACCGGTGC TTGGGTCATG CCTGAAAAGT ACGATAAAGC GTTAGCTGAA
TCCGTAAACT ATCAATATGT TGTATTATTA GAAGATAGTA ACTGGGGATT GACGTGTGAA
TCCTTGGTAA ATGCAGTAAG AATCACGAAA TCTGAGGTCA ACTGGCGGAG CAAAGCTGGG
AAGCGCCCTT GGTTGGCTGG TGTAGTAAAA GAGCAGATGT GTGGCATATT GCATGTGCAA
GCACTCATAG AGTTATTAAA TTCAGGTTTA GGTAGTCAGG ATCCTGTTGG CTGA
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| Protein sequence | MTTSVDETVF DYFSLLLTEV EDESNIQVEA LTADIAEQVF PELISDGSSV EALKPEALNQ
EQVKPDLVNK KAVNIDPLTQ ESSRPAGNES VTEKPEAIEP PRLQTQLKTQ SHNQTHTETQ
ALTKPKIRET DPNLDKLALE QLLAPVFKPE PQIETESIVK LQNQTLAKSK IKTTSVPDKV
SVKPKVDVHV ENKADIKQKQ KQEQELELKT QLGEIPPKVT KDLLETLDDE FQVLFFKVAG
LTLAVPLVSL GGIVKIERIN HIMGRPAWYK GVQTYRDTQL NVVDTGAWVM PEKYDKALAE
SVNYQYVVLL EDSNWGLTCE SLVNAVRITK SEVNWRSKAG KRPWLAGVVK EQMCGILHVQ
ALIELLNSGL GSQDPVG
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